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Installation instructions

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holtzermann17 edited this page Sep 29, 2012 · 27 revisions

INSTALL PLANETARY ✓

git clone git://github.com/cdavid/drupal_planetary.git
ln -s /home/planetary/drupal_planetary /var/www/drupal
cd drupal_planetary
chmod a+w sites/default/files
cp sites/default/default.settings.php sites/default/settings.php
chmod a+w sites/default/settings.php

INSTALL DRUSH ✓

git clone --branch 7.x-5.x http://git.drupal.org/project/drush.git
ln -s /home/planetary/drush/drush /usr/local/bin/drush

CREATE DATABASE ✓

mysql -u root -p

CREATE DATABASE planetary;
GRANT SELECT, INSERT, UPDATE, DELETE, CREATE, DROP, INDEX, ALTER ON planetary.*
TO 'planetary'@'localhost' IDENTIFIED BY 'make-something-up';

CONFIGURE APACHE ✓

<VirtualHost *:80>
  ServerAdmin xxxxxxxxx@gmail.com
  ServerName xxx.yyy.zzz
  DocumentRoot /var/www/drupal/
  <Directory /var/www/drupal/>
      AllowOverride All
      Order allow,deny
      allow from all
  </Directory>
  ErrorLog /var/log/apache2/a.log
  CustomLog /var/log/apache2/a.log combined
</VirtualHost>

INSTALL REQUIRED MODULES ✓

drush -y dl migrate views features reroute_email references \
 pathauto profile2 subform token relation \
 relation_select  legal recaptcha userpoints userpoints_nc \
 privatemsg content_access ctools delete_all devel backup_migrate commentrss \
 nodeaccess wysiwyg views_php sparql filefield_paths date dhtml_menu

drush -y dl og-7.x-2.x-dev entityreference-7.x-1.x-dev entity-7.x-1.x-dev \
 views_bulk_operations-7.x-3.x-dev captcha-7.x-1.x-dev efq_views-7.x-1.x-dev \
 watcher-7.x-1.x-dev rdfx-7.x-2.x-dev

Look through the main installation instructions to make sure you have all the necessary configuration steps sorted out.

INSTALL LATEXML ✓

svn co https://svn.mathweb.org/repos/LaTeXML/branches/arXMLiv

apt-get install perlmagick libxml2 libxml2-dev libxslt1.1 libxslt1-dev \
libxml-libxml-perl libclone-perl libdata-compare-perl libio-prompt-perl \
libparse-recdescent-perl libxml-libxslt-perl libdb5.1 libdb5.1-dev \
libgdbm-dev libarchive-zip-perl unzip

perl -MCPAN -e shell
install Parse::RecDescent XML::LibXSLT DB_File Mojolicious::Lite Data::Compare
quit

perl Makefile.PL
make
make install

CONFIGURE LATEXML TO RUN UNDER APACHE ✓

sudo apt-get install libapache2-mod-perl2 libplack-perl

sudo chgrp -R www-data /path/to/LaTeXML/webapp
sudo chmod -R g+w /path/to/LaTeXML/webapp

Create a "latexml" file in /etc/apache2/sites-available like this:

<VirtualHost *:80>
    ServerName latexml.example.com 
    DocumentRoot /path/to/LaTeXML/webapp
    Header set Access-Control-Allow-Origin * 
    <Perl>
      $ENV{PLACK_ENV} = 'production';
      $ENV{MOJO_HOME} = '/path/to/LaTeXML/webapp';
    </Perl>

    <Location />
      SetHandler perl-script
      PerlHandler Plack::Handler::Apache2
      PerlSetVar psgi_app /path/to/LaTeXML/webapp/ltxmojo
    </Location>

    ErrorLog /var/log/apache2/latexml.error.log
    LogLevel warn
    CustomLog /var/log/apache2/latexml.access.log combined
</VirtualHost>

and turn it on.

SET UP VIRTUOSO ✓

drush dl libraries rdfx sparql_views
drush -y en libraries
drush -y en rdfx sparql_views views_ui rdfui

sudo aptitude install dpkg-dev build-essential autoconf automake \
 libtool flex bison gperf gawk m4 make odbcinst libxml2-dev libssl-dev \
 libreadline-dev

wget http://downloads.sourceforge.net/project/virtuoso/virtuoso/6.1.5/virtuoso-opensource-6.1.5.tar.gz
tar -zxvf virtuoso-opensource-6.1.5.tar.gz
cd virtuoso-opensource-6.1.5

./configure --prefix=/usr/local/ --with-readline --program-transform-name="s/isql/isql-v/"
nice make
sudo make install

Invoke via screen

/usr/local/bin/virtuoso-t +configfile /usr/local/var/lib/virtuoso/db/virtuoso.ini -fd

SET UP PYRDFA ✓

First of all, if you're going to use our pyrdfa module, don't forget that you'll have to patch the Drupal core (see full instructions for details)!

git clone git://github.com/RDFLib/PyRDFa.git
cd PyRDFa
sudo python setup.py install

The relevant executable is in ./scripts/localRDFa.py. You can test it by pulling down some RDFa enhanced webpage and running

python /path/to/PyRDFa/scripts/localRDFa.py -x in.html > out.xml

If you run into trouble it may be because you don't have the right versions of required libraries installed. I solved these problems with the following commands (obtaining rdflib version 3.4.0-dev and html5lib version 0.95) and then rebuilt/reinstalled PyRDFa as above.

sudo pip install markdown
git clone git://github.com/RDFLib/rdflib.git
cd rdflib && sudo python setup.py install

(Further note: ideally this would be set up to run as a web service, similar to LaTeXML and so on, but that will take a moment to set up.)

GET THE ACE EDITOR, AND PUT IT IN YOUR LIBRARIES DIRECTORY ✓

git clone git://github.com/ajaxorg/ace.git
cd ace
npm install
node Makefile.dryice.js full

GET THE SHAREJS REPOSITORY ✓

git clone git://github.com/jucovschi/ShareJS.git
cd ShareJS
git checkout ace_services

sudo apt-get install redis-server coffeescript

Or grab the latest coffeescript if you're on an older system: http://coffeescript.org/

npm install redis
npm link
cake.coffeescript build
cake.coffeescript webclient

(Alternatively, just cake depending on how you installed coffeescript.)

RUN THE SHAREJS SERVER (E.G. WITHIN GNU SCREEN) VIA ✓

bin/exampleserver

INSTALL APACHE SOLR ✓

wget http://mirror.ox.ac.uk/sites/rsync.apache.org/lucene/solr/3.6.1/apache-solr-3.6.1-src.tgz

tar -zxvf apache-solr-3.6.1-src.tgz
cd apache-solr-3.6.1
sudo apt-get install ant

ant ivy-bootstrap

If you don't have the JDK installed you can do something like this (or just sudo apt-get install openjdk-6-jdk):

sudo add-apt-repository ppa:ferramroberto/java
sudo apt-get update
sudo apt-get install sun-java6-jdk

ant compile

mv solr/example/solr/conf/schema.xml solr/example/solr/conf/schema.bak
mv solr/example/solr/conf/solrconfig.xml solr/example/solr/conf/solrconfig.bak
mv solr/example/solr/conf/protwords.txt solr/example/solr/conf/protwords.bak

cd ../drupal_planetary
drush dl apachesolr

cp sites/all/modules/apachesolr/solr-conf/schema-solr3x.xml \
 ../apache-solr-3.6.1/solr/example/solr/conf/schema.xml
cp sites/all/modules/apachesolr/solr-conf/solrconfig.xml \
 ../apache-solr-3.6.1/solr/example/solr/conf/solrconfig.xml
cp sites/all/modules/apachesolr/solr-conf/protwords.txt \
 ../apache-solr-3.6.1/solr/example/solr/conf/protwords.txt

The following step is important to get the relevant webapp to build.

cd ../apache-solr-3.6.1/solr/
ant example
lynx http://localhost:8983/solr/admin/

Finally:

drush -y en apachesolr apachesolr_search

Now you can visit admin/config/search/apachesolr to check out the configuration and control re-indexing. You can check out the details of your index at admin/reports/apachesolr/solr. In order to set Apache Solr as the default search engine (resp. hide the other search engines) you need to change the relevant radio button (resp. tick box) at admin/config/search/settings.

To set up faceted search, install facetapi:

drush -y dl facetapi-7.x-1.x-dev
drush -y en facetapi

and configure at admin/config/search/apachesolr/settings/solr/facets.

Some further information (YMMV) at http://drupalcode.org/project/apachesolr.git/blob_plain/refs/heads/7.x-1.x:/README.txt

If you want to search user pages, you should install

drush -y dl apachesolr_user
drush -y en apachesolr_user

and visit admin/config/search/apachesolr to tick the box selecting User as an indexable type.

There are some additional plugins but details on those will follow later. See this ticket #141 for some further notes.

LATEX INTEGRATION TO GENERATE PDFs ✓

This is handled by the planetmath_view_pdf module: make sure the PDFLaTeX command is correct for your system (e.g. /usr/bin/pdflatex perhaps? Or /usr/local/texlive/2011/bin/x86_64-linux/pdflatex?) and create the output directory at sites/default/files/texpdf/.

INSTALL NNEXUS ✓

git clone git@github.com:dginev/nnexus.git
wget http://li101-104.members.linode.com/nnexus.sql.gz
gunzip nnexus.sql.gz

mysql> grant all on nnexusdb.* to 'nnexususer'@localhost identified by 'PASSWORD';
mysql> create database nnexusdb;

mysql -u nnexususer --password=PASSWORD nnexusdb < nnexus.sql

sudo perl -MCPAN -e shell
cpan> install XML::Simple Data::Dumper LWP::Simple XML::Writer XML::SAX Unicode::String Graph
cpan> exit

Now edit baseconf.xml so that dbname, dbuser, and dbpass match the values you specified above.

You can then run the NNexus server (e.g. from within GNU Screen) via

./nnexusserver.pl

Alternatively, you can run it using Mojolicious and several other standard perl modules which can be installed via apt-get or cpan (cf. LaTeXML section above):

apt-get install libmojolicious-perl libxml-simple-perl \
  libunicode-string-perl libgraph-perl libjson-perl

Then, in order to run the server:

morbo --listen=http://*:3001 nnexusmojo.pl

CONFIGURE NNEXUS TO RUN UNDER APACHE ✓

Create a "nnexus" file in /etc/apache2/sites-available like this:

<VirtualHost *:80>
    ServerName nnexus.example.com 
    DocumentRoot /path/to/nnexus
    Header set Access-Control-Allow-Origin * 
    <Perl>
      $ENV{PLACK_ENV} = 'production';
      $ENV{MOJO_HOME} = '/path/to/nnexus';
    </Perl>

    <Location />
      SetHandler perl-script
      PerlHandler Plack::Handler::Apache2
      PerlSetVar psgi_app /path/to/nnexus/nnexusmojo.pl
    </Location>

    ErrorLog /var/log/apache2/nnexus.error.log
    LogLevel warn
    CustomLog /var/log/apache2/nnexus.access.log combined
</VirtualHost>

and turn it on.

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