Skip to content

Releases: MoBiodiv/mobr

v3.0.0

18 Aug 01:29
Compare
Choose a tag to compare

version 3.0.0


Major update

new features

  • calc_comm_div now replaces get_mob_stats. The ancillary plotting function
    plot.mob_stats is now replaced with plot_comm_div. We hope to eventually
    add back in bootstrapping confidence intervals for the statistics but that is
    not currently supported. If you would like to know more about this design
    decision see the discussion here: #255.
  • plot_rarefaction is a bit more versatile with many new arguments
    that provide options for smoothing or averaging rarefaction curves
    when making comparisons within or between groups respectively.
  • The R package beta_C by Thore Engel has now been absorbed into
    the mobr package. Use function calc_beta_div or calc_comm_div
    with beta in the scales argument to compute coverage based beta
    diversity. Note the index in this case is S_C (i.e., richness S for a
    given level of coverage C)
  • a vignette was added to demonstrate how to make computations of beta
    diversity using mobr called beta_div_demo

v2.0.0

03 Sep 19:10
Compare
Choose a tag to compare

This is the second major release of the mobr package. This is the first version sent to CRAN. The major new features revolve around the multi-scale analysis which has been generalized to work along continuous enviornmental gradients. Additional new features include: a new flavor of spatial rarefaction, improved documentation, testing of the rarefaction algo.

v1.0

25 Sep 01:49
Compare
Choose a tag to compare

First major release of the package.

Features:

  • carry out methods described in McGlinn et al. 2018
  • compute four types of rarefaction curves
  • compare differences in rarefaction between discrete explanatory variables (e.g., treatments)