The Molecular Simulation Group
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rotationaldiffusion
rotationaldiffusion PublicExtract rotational diffusion tensors of molecules from MD simulations.
Python
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- velocity Public
velocity.py reads in GROMACS trr trajectory (that inclides velocity information) and calculates center of mass translational velocity and angular velocity. It also computes translational and rotational kinetic energies, temperatures, velocity autocorrelation functions and power spectra
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