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Bug fix for unit conversion error in ccpp_prebuild.py (variables that are slices of a n+1 dimensional array have wrong allocation) #172

Bug fix for unit conversion error in ccpp_prebuild.py (variables that are slices of a n+1 dimensional array have wrong allocation)

Bug fix for unit conversion error in ccpp_prebuild.py (variables that are slices of a n+1 dimensional array have wrong allocation) #172

Workflow file for this run

name: ccpp-prebuild
on:
pull_request:
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
defaults:
run:
shell: bash
jobs:
unit-tests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8","3.9","3.10","3.11","3.12"]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install flake8 pytest
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Install open mpi
run: |
wget https://github.com/open-mpi/ompi/archive/refs/tags/v4.1.6.tar.gz
tar -xvf v4.1.6.tar.gz
cd ompi-4.1.6
./autogen.pl
./configure --prefix=/home/runner/ompi-4.1.6
make -j4
make install
echo "LD_LIBRARY_PATH=/home/runner/ompi-4.1.6/lib:$LD_LIBRARY_PATH" >> $GITHUB_ENV
echo "PATH=/home/runner/ompi-4.1.6/bin:$PATH" >> $GITHUB_ENV
- name: ccpp-prebuild unit tests
run: |
export PYTHONPATH=$(pwd)/scripts:$(pwd)/scripts/parse_tools
cd test_prebuild
pytest
- name: ccpp-prebuild blocked data tests
run: |
cd test_prebuild/test_blocked_data
python3 ../../scripts/ccpp_prebuild.py --config=ccpp_prebuild_config.py --builddir=build
cd build
cmake ..
make
./test_blocked_data.x
- name: ccpp-prebuild chunked data tests
run: |
cd test_prebuild/test_chunked_data
python3 ../../scripts/ccpp_prebuild.py --config=ccpp_prebuild_config.py --builddir=build
cd build
cmake ..
make
./test_chunked_data.x