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Add 9-species model weights link to FAQ #303

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7 changes: 7 additions & 0 deletions docs/faq.md
Original file line number Diff line number Diff line change
Expand Up @@ -145,6 +145,13 @@ You can use any of the scheduler classes available in [`torch.optim.lr_scheduler

## Miscellaneous

**Where can I find Casanovo model weights trained on the nine-species benchmark?**

You can find the Casanovo weights corresponding to the nine-species benchmark [on Zenodo](https://doi.org/10.5281/zenodo.10694984), compatible with Casanovo v4.x.x.
These weights correspond to training and validation on eight species using the default configurations, with the remaining species held out for testing, as indicated by the file names.
Note that these weights are only intended for evaluation purposes on this specific benchmark dataset.
For general-purpose usage of Casanovo, use its [default weights](https://casanovo.readthedocs.io/en/latest/getting_started.html#download-model-weights) instead, as these will give significantly improved performance.

**How can I generate a precision–coverage curve?**

You can evaluate a trained Casanovo model compared to ground-truth peptide labels using a precision–coverage curve.
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