Merge pull request #38 from Novartis/Update-documentation-build-and-e… #66

	name: Sphinx Docs

	on:
	push:
	branches: [ master ]

	jobs:
	build:
	runs-on: ubuntu-latest

	steps:
	- name: Install graphviz - Ubuntu
	run: sudo apt-get install graphviz pandoc

	- name: Checkout
	uses: actions/checkout@v2.3.1
	with:
	persist-credentials: false
	fetch-depth: 0

	- name: Setup Python
	uses: actions/setup-python@v2
	with:
	python-version: 3.9

	- name: Setup R
	uses: r-lib/actions/setup-r@v2
	with:
	r-version: '3.6.2'

	- name: Install renv
	run: Rscript -e "install.packages(c('renv'), repos='https://cran.rstudio.com')"

	- name: Install python packages
	run: pip install tox

	- name: Tox
	run: tox -e docs

	- name: Deploy docs to gh-pages
	uses: JamesIves/github-pages-deploy-action@3.7.1
	with:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	BRANCH: docs
	FOLDER: docs
	CLEAN: true

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