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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 854 442

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 206 73

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 258 125

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 37 32

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 78 57

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    HTML 180 88

Repositories

Showing 10 of 295 repositories
  • ClinicalCharacteristics Public

    [under development] table shell approach to OMOP characterization

    OHDSI/ClinicalCharacteristics’s past year of commit activity
    R 0 Apache-2.0 0 17 0 Updated Jul 1, 2024
  • ETL-LambdaBuilder Public

    CDM Builder leveraging AWS Lambda

    OHDSI/ETL-LambdaBuilder’s past year of commit activity
    C# 11 Apache-2.0 15 3 0 Updated Jul 1, 2024
  • CommunityDashboard Public

    Dashboard to monitor the health of the OHDSI community. A Flask app of Dash Dashboards for tracking public API's

    OHDSI/CommunityDashboard’s past year of commit activity
    TypeScript 5 Apache-2.0 1 11 0 Updated Jul 1, 2024
  • CohortIncidence Public

    Contains the Java and R assets to perform Incidence calculations on a CDM

    OHDSI/CohortIncidence’s past year of commit activity
    R 5 2 5 0 Updated Jul 1, 2024
  • Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    OHDSI/Vocabulary-v5.0’s past year of commit activity
    PLpgSQL 206 Unlicense 73 225 17 Updated Jul 1, 2024
  • DataQualityDashboard Public

    A tool to help improve data quality standards in observational data science.

    OHDSI/DataQualityDashboard’s past year of commit activity
    JavaScript 127 Apache-2.0 91 53 8 Updated Jun 30, 2024
  • EvidenceSynthesis Public

    An R package for combining evidence from multiple sources (e.g. multiple data sites)

    OHDSI/EvidenceSynthesis’s past year of commit activity
    R 8 8 4 (1 issue needs help) 0 Updated Jun 28, 2024
  • CohortGenerator Public

    An R package for instantiating cohorts using data in the CDM.

    OHDSI/CohortGenerator’s past year of commit activity
    R 11 10 18 (1 issue needs help) 1 Updated Jun 28, 2024
  • Strategus Public

    [Under development] An R packages for coordinating and executing analytics using HADES modules

    OHDSI/Strategus’s past year of commit activity
    R 6 10 31 4 Updated Jun 28, 2024
  • OhdsiShinyModules Public

    An R package containing Shiny modules used by various OHDSI Shiny apps

    OHDSI/OhdsiShinyModules’s past year of commit activity
    R 7 9 95 (1 issue needs help) 6 Updated Jun 28, 2024
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