v0.6.0

genome-seek (v0.6.0)

First public release of the genome-seek pipeline!

genome-seek is a comprehensive clinical WGS pipeline that is focused on speed. Each tool in the pipeline was benchmarked and selected due to its low run times without sacrificing accuracy or precision. genome-seek run can be used to call germline and somatic variants, infer SVs & CNVs, call hla-types, annotate variants, and much more!

The pipeline also runs a comprehensive set of quality-control tools so you can assess the quality of your data.

What's Changed

• Changes to calling and merging somatic variants by @jlac and @skchronicles in #15

Contributors

@jlac, @KeyTals, @skchronicles

Full Changelog: https://github.com/OpenOmics/genome-seek/commits/v0.6.0