sif-explorer

A web service for graph theoretic exploration of SIF networks.

Requirements

• Node v14.x.x
• Unzip (get it with sudo apt install unzip)
• Java (preferably Java 11, get it with sudo apt install openjdk-11-jdk)

Check node version

• Enter node --version in your terminal and it should output v14.x.x
• if you do not see such output in your terminal, then you have to install node JS

Install Node JS

Linux

1. Using nvm

sudo apt-get update
sudo apt-get upgrade

Install curl

sudo apt install curl

Install nvm

curl -o- https://raw.githubusercontent.com/nvm-sh/nvm/v0.39.1/install.sh | bash

Installing nvm using nvm

nvm install 14

Check version

node --version

Windows

• Visit https://nodejs.org/en/ and download installation file and install it

MacOS

• Install using homebrew:

/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"
brew install node
node --version

Getting Started

git clone https://github.com/PathwayAndDataAnalysis/causalpath-newt-webserver.git
cd causalpath-newt-webserver
npm install

npm start

Latest Updates:

• Click on > Query On SIF Graph Server and you will see the newt window.

• Now for querying SifGraph click on Query button in Newt window.

• Two Options of query will open up select SifGraph Server (NEW).

• Select the query option from the dropdown menu.

ToDo:

• Add API call to make query execute.
• Add pending query options.