Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

column sorting in DE visualizations can be wrong #1296

Open
ppavlidis opened this issue Nov 26, 2024 · 1 comment
Open

column sorting in DE visualizations can be wrong #1296

ppavlidis opened this issue Nov 26, 2024 · 1 comment
Labels
bug gui Issues or pull requests involving the Web UI

Comments

@ppavlidis
Copy link
Collaborator

I've noticed a variety of glitches in the heatmaps, where it seems we don't always get the column ordering correct.

Here is a side-by-side of DE for two factors in GSE7621. This data set has a confound between sex and the disease condition, but it looks to me that we aren't sorting the data correctly when viewing the top disease hits (left panel). On the right, it looks correct, for the sex comparison: you can see XIST follows sex, but that isn't the case for the left panel. It looks like the data are still sorted by sex.

image

Another issue I've seen (maybe it's already filed, couldn't find it) is occasionally the experimental design won't display at all.

I haven't noticed any pattern to this, some investigation on the server side logs might help. I have a suspicion that something in our caching isn't working right.

@ppavlidis ppavlidis added bug gui Issues or pull requests involving the Web UI labels Nov 26, 2024
@ppavlidis
Copy link
Collaborator Author

#1026 is the one about missing the design showing; #1180, #969 and #1222 involve the same interface

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug gui Issues or pull requests involving the Web UI
Projects
None yet
Development

No branches or pull requests

1 participant