Pavlidis lab
The Pavlidis Lab at the University of British Columbia
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📊 Gene expression in neuroexpresso database
R
18
1
Genomics data re-analysis
Java
23
6
Marker gene profile estimation method used in NeuroExpresso manuscript
R
14
2
Repositories
Showing 10 of 62 repositories
Gemma
Public
Genomics data re-analysis
PavlidisLab/Gemma’s past year of commit activity
Java
23
Apache-2.0
6
315
29
Updated Nov 22, 2024
PavlidisLab/TR_singlecell’s past year of commit activity
R
0
MIT
0
0
0
Updated Nov 5, 2024
PavlidisLab/pavlab-starter-parent’s past year of commit activity
0
Apache-2.0
0
7
1
Updated Nov 2, 2024
rnaseq-pipeline
Public
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
PavlidisLab/rnaseq-pipeline’s past year of commit activity
Python
22
Unlicense
4
30
1
Updated Oct 28, 2024
baseCode
Public
Data structures, math and statistics tools, and utilities that are often needed across projects.
PavlidisLab/baseCode’s past year of commit activity
Java
5
Apache-2.0
0
3
2
Updated Oct 25, 2024
TGEMO
Public
The Gemma Ontology
PavlidisLab/TGEMO’s past year of commit activity
Python
1
1
3
1
Updated Oct 25, 2024
PavlidisLab/neuroexpresso’s past year of commit activity
R
18
GPL-2.0
1
10
0
Updated Oct 25, 2024
gemma.R
Public
An R wrapper for the Gemma RESTful API
PavlidisLab/gemma.R’s past year of commit activity
R
10
Apache-2.0
1
8
0
Updated Oct 22, 2024
ermineR
Public
R wrapper for ermineJ
PavlidisLab/ermineR’s past year of commit activity
R
6
4
3
0
Updated Oct 15, 2024
rdp
Public
Researcher Gene Registry. Originally developed for the Canadian Rare Disease Models & Mechanisms Network
PavlidisLab/rdp’s past year of commit activity
Java
5
Apache-2.0
8
144
5
Updated Oct 9, 2024
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