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chore: update dependencies (#1427) #408

chore: update dependencies (#1427)

chore: update dependencies (#1427) #408

Workflow file for this run

# SPDX-FileCopyrightText: : 2021-2024 The PyPSA-Eur Authors
#
# SPDX-License-Identifier: CC0-1.0
name: Test workflows
on:
push:
branches:
- master
pull_request:
branches:
- master
schedule:
- cron: "0 5 * * 1-6"
- cron: "0 5 * * 0"
# Cancel any in-progress runs when a new run is triggered
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
env:
BASE_ENV: envs/environment.yaml
jobs:
run-tests:
name: OS
runs-on: ${{ matrix.os }}-latest
strategy:
fail-fast: false
matrix:
# Run windows only on scheduled runs on Sundays, otherwise ignore
os: ${{ github.event.schedule == '0 5 * * 0' && fromJson('["ubuntu", "macos", "windows"]') || fromJson('["ubuntu", "macos"]') }}
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- name: Setup env file path (ubuntu)
if: matrix.os == 'ubuntu'
run: |
echo "env_file=envs/linux-pinned.yaml" >> $GITHUB_ENV
- name: Setup env file path (macos and windows)
if: matrix.os != 'ubuntu'
run: |
echo "env_file=envs/${{ matrix.os }}-pinned.yaml" >> $GITHUB_ENV
- name: Use base env file if it was changed
run: |
git fetch origin master
if git diff --name-only origin/master | grep '${{ env.BASE_ENV }}'; then
echo "Base env ${{ env.BASE_ENV }} changed. Using it instead of pinned envs."
echo "env_file=${{ env.BASE_ENV }}" >> $GITHUB_ENV
else
echo "Base env ${{ env.BASE_ENV }} not changed. Using pinned envs."
fi
- name: Setup cache keys
run: |
echo "WEEK=$(date +'%Y%U')" >> $GITHUB_ENV # data and cutouts
- uses: actions/cache@v4
with:
path: |
data
cutouts
key: data-cutouts-${{ env.WEEK }}
- uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: pypsa-eur
- name: Cache Conda env
uses: actions/cache@v4
with:
path: ${{ env.CONDA }}/envs
key: conda-${{ runner.os }}-${{ runner.arch }}-${{ hashFiles(format('{0}', env.env_file)) }}
id: cache-env
- name: Update environment
if: steps.cache-env.outputs.cache-hit != 'true'
run: |
conda env update -n pypsa-eur -f ${{ env.env_file }}
echo "Run conda list" && conda list
- name: Run snakemake test workflows
run: |
make test
- name: Upload artifacts
if: always()
uses: actions/upload-artifact@v4
with:
name: results-${{ matrix.os }}
path: |
logs
.snakemake/log
results
retention-days: 3
run-tests-on-dev-deps:
name: Inhouse
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
inhouse:
- pypsa
- atlite
- powerplantmatching
- linopy
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- name: Use base env file if it was changed
run: |
git fetch origin master
if git diff --name-only origin/master | grep '${{ env.BASE_ENV }}'; then
echo "Base env ${{ env.BASE_ENV }} changed. Using it instead of pinned envs."
echo "env_file=${{ env.BASE_ENV }}" >> $GITHUB_ENV
else
echo "Base env ${{ env.BASE_ENV }} not changed. Using pinned envs."
echo "env_file=envs/linux-pinned.yaml" >> $GITHUB_ENV
fi
# Only run checks if package is not pinned
- name: Check if inhouse package is pinned
run: |
grep_line=$(grep -- '- ${{ matrix.inhouse }}' ${{ env.BASE_ENV }})
if [[ $grep_line == *"<"* || $grep_line == *"=="* ]]; then
echo "pinned=true" >> $GITHUB_ENV
else
echo "pinned=false" >> $GITHUB_ENV
fi
- name: Setup cache keys
if: env.pinned == 'false'
run: |
echo "WEEK=$(date +'%Y%U')" >> $GITHUB_ENV # data and cutouts
- uses: actions/cache@v4
if: env.pinned == 'false'
with:
path: |
data
cutouts
key: data-cutouts-${{ env.WEEK }}
- uses: conda-incubator/setup-miniconda@v3
if: env.pinned == 'false'
with:
activate-environment: pypsa-eur
- name: Cache Conda env
if: env.pinned == 'false'
uses: actions/cache@v4
with:
path: ${{ env.CONDA }}/envs
key: conda-${{ runner.os }}-${{ runner.arch }}-${{ matrix.inhouse }}-${{ hashFiles(format('{0}', env.env_file)) }}
id: cache-env
- name: Update environment
if: env.pinned == 'false' && steps.cache-env.outputs.cache-hit != 'true'
run: |
conda env update -n pypsa-eur -f ${{ env.env_file }}
echo "Run conda list" && conda list
- name: Install inhouse packages from master
if: env.pinned == 'false'
run: |
python -m pip install git+https://github.com/PyPSA/${{ matrix.inhouse }}.git@master
- name: Run snakemake test workflows
if: env.pinned == 'false'
run: |
make test
- name: Upload artifacts
if: env.pinned == 'false' && always()
uses: actions/upload-artifact@v4
with:
name: results-inhouse-${{ matrix.inhouse }}
path: |
logs
.snakemake/log
results
retention-days: 3