bump to 0.8.3 and cleanup (#129)

QuantumSavory · Jun 10, 2023 · d60f9f0 · d60f9f0 · Krastanov · Jun 10, 2023
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -5,6 +5,9 @@
 
 # News
 
+## v0.8.3 - 2023-06-10
+
+- Improvements to printing and documentation.
 ## v0.8.2 - 2023-05-22
 
 - Initial, experimental, unexported helper functions for work with error correcting codes. Might change at any time.

diff --git a/Project.toml b/Project.toml
@@ -1,7 +1,7 @@
 name = "QuantumClifford"
 uuid = "0525e862-1e90-11e9-3e4d-1b39d7109de1"
 authors = ["Stefan Krastanov <stefan@krastanov.org>"]
-version = "0.8.2"
+version = "0.8.3"
 
 [deps]
 Combinatorics = "861a8166-3701-5b0c-9a16-15d98fcdc6aa"

diff --git a/benchmark/README.md b/benchmark/README.md
@@ -1 +1 @@
-These benchmark results are tracked at [github.com/Krastanov/QuantumCliffordBenchmarksLog](https://github.com/Krastanov/QuantumCliffordBenchmarksLog).
+These benchmark results are tracked at [github.com/QuantumSavory/QuantumCliffordBenchmarksLog](https://github.com/QuantumSavory/QuantumCliffordBenchmarksLog).
diff --git a/docs/src/noisycircuits.md b/docs/src/noisycircuits.md
@@ -16,4 +16,4 @@ We have experimental support for simulation of noisy Clifford circuits which can
 Both [Monte Carlo](@ref noisycircuits_mc) and [Perturbative Expansion](@ref noisycircuits_perturb) approaches are supported. When performing a perturbative expansion in the noise parameter, the expansion can optionally be performed symbolically, to arbitrary high orders.
 
 Multiple [notebooks with examples](@ref tutandpub) are also available.
-For instance, see this tutorial on [entanglement purification for many examples](https://github.com/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb).
+For instance, see this tutorial on [entanglement purification for many examples](https://github.com/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb).
diff --git a/docs/src/noisycircuits_mc.md b/docs/src/noisycircuits_mc.md
@@ -46,7 +46,7 @@ And we can run a Monte Carlo simulation of that circuit with [`mctrajectories`](
 mctrajectories(initial_state, circuit, trajectories=500)
 ```
 
-For more examples, see the [notebook comparing the Monte Carlo and Perturbative method](https://nbviewer.jupyter.org/github/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Perturbative_Expansions_vs_Monte_Carlo_Simulations.ipynb) or this tutorial on [entanglement purification for many examples](https://github.com/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb).
+For more examples, see the [notebook comparing the Monte Carlo and Perturbative method](https://nbviewer.jupyter.org/github/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Perturbative_Expansions_vs_Monte_Carlo_Simulations.ipynb) or this tutorial on [entanglement purification for many examples](https://github.com/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb).
 
 ## Interface for custom operations
 

diff --git a/docs/src/noisycircuits_perturb.md b/docs/src/noisycircuits_perturb.md
@@ -44,11 +44,11 @@ circuit = [n,g1,g2,m,v]
 petrajectories(initial_state, circuit)
 ```
 
-For more examples, see the [notebook comparing the Monte Carlo and Perturbative method](https://nbviewer.jupyter.org/github/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Perturbative_Expansions_vs_Monte_Carlo_Simulations.ipynb) or this tutorial on [entanglement purification](https://github.com/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb).
+For more examples, see the [notebook comparing the Monte Carlo and Perturbative method](https://nbviewer.jupyter.org/github/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Perturbative_Expansions_vs_Monte_Carlo_Simulations.ipynb) or this tutorial on [entanglement purification](https://github.com/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb).
 
 ## Symbolic expansions
 
-The perturbative expansion method works with symbolic variables as well. One can use any of the symbolic libraries available in Julia and simply plug symbolic parameters in lieu of numeric parameters. A detailed example is available as a [Jupyter notebook](https://nbviewer.jupyter.org/github/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Symbolic_Perturbative_Expansions.ipynb).
+The perturbative expansion method works with symbolic variables as well. One can use any of the symbolic libraries available in Julia and simply plug symbolic parameters in lieu of numeric parameters. A detailed example is available as a [Jupyter notebook](https://nbviewer.jupyter.org/github/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Symbolic_Perturbative_Expansions.ipynb).
 
 ## Interface for custom operations
 

diff --git a/docs/src/tutandpub.md b/docs/src/tutandpub.md
@@ -4,11 +4,11 @@ This list has a number of notebooks with tutorials, examples, and reproduction o
 
 ## On the topic of explicit use of the Tableaux formalism for Stabilizer states 
 
-- [Quantum coding with low-depth random circuits](https://github.com/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Stabilizer_Codes_Based_on_Random_Circuits.ipynb) reproducing results from [gullans2020quantum](@cite). [view on nbviewer.jupyter.org](https://nbviewer.jupyter.org/github/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Stabilizer_Codes_Based_on_Random_Circuits.ipynb)
+- [Quantum coding with low-depth random circuits](https://github.com/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Stabilizer_Codes_Based_on_Random_Circuits.ipynb) reproducing results from [gullans2020quantum](@cite). [view on nbviewer.jupyter.org](https://nbviewer.jupyter.org/github/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Stabilizer_Codes_Based_on_Random_Circuits.ipynb)
 
 
 ## On the Monte Carlo and Perturbative Expansions for **Noisy** Clifford circuits
 
-- [In-depth study of multi-partite entanglement purification circuits](https://github.com/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb) reproducing results from [krastanov2020heterogeneous](@cite). [view on nbviewer.jupyter.org](https://nbviewer.jupyter.org/github/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb)
-- [Comparing the Monte Carlo and Perturbative method for noisy circuit simulations](https://github.com/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Perturbative_Expansions_vs_Monte_Carlo_Simulations.ipynb). [view on nbviewer.jupyter.org](https://nbviewer.jupyter.org/github/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Perturbative_Expansions_vs_Monte_Carlo_Simulations.ipynb)
-- [Showcasing symbolic perturbative expansions of noisy circuits](https://github.com/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Symbolic_Perturbative_Expansions.ipynb). [view on nbviewer.jupyter.org](https://nbviewer.jupyter.org/github/Krastanov/QuantumClifford.jl/blob/master/docs/src/notebooks/Symbolic_Perturbative_Expansions.ipynb)
+- [In-depth study of multi-partite entanglement purification circuits](https://github.com/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb) reproducing results from [krastanov2020heterogeneous](@cite). [view on nbviewer.jupyter.org](https://nbviewer.jupyter.org/github/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Noisy_Circuits_Tutorial_with_Purification_Circuits.ipynb)
+- [Comparing the Monte Carlo and Perturbative method for noisy circuit simulations](https://github.com/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Perturbative_Expansions_vs_Monte_Carlo_Simulations.ipynb). [view on nbviewer.jupyter.org](https://nbviewer.jupyter.org/github/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Perturbative_Expansions_vs_Monte_Carlo_Simulations.ipynb)
+- [Showcasing symbolic perturbative expansions of noisy circuits](https://github.com/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Symbolic_Perturbative_Expansions.ipynb). [view on nbviewer.jupyter.org](https://nbviewer.jupyter.org/github/QuantumSavory/QuantumClifford.jl/blob/master/docs/src/notebooks/Symbolic_Perturbative_Expansions.ipynb)