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Becheler committed Sep 25, 2024
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Expand Up @@ -254,7 +254,7 @@ <h1><a class="anchor" id="ex1"></a>
<div class="line"> assert(tree[cd_edge].size() == 0);</div>
<div class="line">}</div>
<div class="ttc" id="aclassquetzal_1_1coalescence_1_1binary__tree_html"><div class="ttname"><a href="classquetzal_1_1coalescence_1_1binary__tree.html">quetzal::coalescence::binary_tree</a></div><div class="ttdef"><b>Definition</b> binary_tree.hpp:328</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> newick_parser_2.cpp:12</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> geography_dispersal_kernel_4.cpp:13</div></div>
<div class="ttc" id="astructvertex__info_html"><div class="ttname"><a href="structvertex__info.html">vertex_info</a></div><div class="ttdef"><b>Definition</b> coalescence_binary_tree_2.cpp:5</div></div>
</div><!-- fragment --> <h1><a class="anchor" id="ex2"></a>
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Expand Up @@ -238,7 +238,7 @@ <h1><a class="anchor" id="ex1"></a>
<div class="line"> assert(tree[b].field1.size() == tree[b].field2);</div>
<div class="line">}</div>
<div class="ttc" id="aclassquetzal_1_1coalescence_1_1binary__tree_html"><div class="ttname"><a href="classquetzal_1_1coalescence_1_1binary__tree.html">quetzal::coalescence::binary_tree</a></div><div class="ttdef"><b>Definition</b> binary_tree.hpp:328</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> newick_parser_2.cpp:12</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> geography_dispersal_kernel_4.cpp:13</div></div>
<div class="ttc" id="astructvertex__info_html"><div class="ttname"><a href="structvertex__info.html">vertex_info</a></div><div class="ttdef"><b>Definition</b> coalescence_binary_tree_2.cpp:5</div></div>
</div><!-- fragment --> <h1><a class="anchor" id="ex2"></a>
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Expand Up @@ -213,7 +213,7 @@ <h1><a class="anchor" id="ex1"></a>
<div class="line"> std::cout &lt;&lt; <span class="stringliteral">&quot;Degree of inner vertex c is &quot;</span> &lt;&lt; tree.degree(c) &lt;&lt; std::endl;</div>
<div class="line">}</div>
<div class="ttc" id="aclassquetzal_1_1coalescence_1_1binary__tree_html"><div class="ttname"><a href="classquetzal_1_1coalescence_1_1binary__tree.html">quetzal::coalescence::binary_tree</a></div><div class="ttdef"><b>Definition</b> binary_tree.hpp:328</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> newick_parser_2.cpp:12</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> geography_dispersal_kernel_4.cpp:13</div></div>
<div class="ttc" id="astructvertex__info_html"><div class="ttname"><a href="structvertex__info.html">vertex_info</a></div><div class="ttdef"><b>Definition</b> coalescence_binary_tree_2.cpp:5</div></div>
</div><!-- fragment --> <h1><a class="anchor" id="ex2"></a>
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Expand Up @@ -250,7 +250,7 @@ <h1><a class="anchor" id="ex1"></a>
<div class="line"> assert(tree[other_edges[0]].size() == 0);</div>
<div class="line">}</div>
<div class="ttc" id="aclassquetzal_1_1coalescence_1_1k__ary__tree_html"><div class="ttname"><a href="classquetzal_1_1coalescence_1_1k__ary__tree.html">quetzal::coalescence::k_ary_tree</a></div><div class="ttdef"><b>Definition</b> k_ary_tree.hpp:349</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> newick_parser_2.cpp:12</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> geography_dispersal_kernel_4.cpp:13</div></div>
<div class="ttc" id="astructvertex__info_html"><div class="ttname"><a href="structvertex__info.html">vertex_info</a></div><div class="ttdef"><b>Definition</b> coalescence_binary_tree_2.cpp:5</div></div>
</div><!-- fragment --> <h1><a class="anchor" id="ex2"></a>
Output</h1>
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Expand Up @@ -240,7 +240,7 @@ <h1><a class="anchor" id="ex1"></a>
<div class="line"> assert(tree[b].field1.size() == tree[b].field2);</div>
<div class="line">}</div>
<div class="ttc" id="aclassquetzal_1_1coalescence_1_1k__ary__tree_html"><div class="ttname"><a href="classquetzal_1_1coalescence_1_1k__ary__tree.html">quetzal::coalescence::k_ary_tree</a></div><div class="ttdef"><b>Definition</b> k_ary_tree.hpp:349</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> newick_parser_2.cpp:12</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> geography_dispersal_kernel_4.cpp:13</div></div>
<div class="ttc" id="astructvertex__info_html"><div class="ttname"><a href="structvertex__info.html">vertex_info</a></div><div class="ttdef"><b>Definition</b> coalescence_binary_tree_2.cpp:5</div></div>
</div><!-- fragment --> <h1><a class="anchor" id="ex2"></a>
Output</h1>
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Expand Up @@ -232,7 +232,7 @@ <h1><a class="anchor" id="ex1"></a>
<div class="line"> assert(tree[other_edges[0]].size() == 0);</div>
<div class="line">}</div>
<div class="ttc" id="aclassquetzal_1_1coalescence_1_1k__ary__tree_html"><div class="ttname"><a href="classquetzal_1_1coalescence_1_1k__ary__tree.html">quetzal::coalescence::k_ary_tree</a></div><div class="ttdef"><b>Definition</b> k_ary_tree.hpp:349</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> newick_parser_2.cpp:12</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> geography_dispersal_kernel_4.cpp:13</div></div>
<div class="ttc" id="astructvertex__info_html"><div class="ttname"><a href="structvertex__info.html">vertex_info</a></div><div class="ttdef"><b>Definition</b> coalescence_binary_tree_2.cpp:5</div></div>
</div><!-- fragment --> <h1><a class="anchor" id="ex2"></a>
Output</h1>
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Expand Up @@ -214,7 +214,7 @@ <h1><a class="anchor" id="ex1"></a>
<div class="line"> std::cout &lt;&lt; <span class="stringliteral">&quot;Degree of inner vertex c is &quot;</span> &lt;&lt; tree.degree(c) &lt;&lt; std::endl;</div>
<div class="line">}</div>
<div class="ttc" id="aclassquetzal_1_1coalescence_1_1k__ary__tree_html"><div class="ttname"><a href="classquetzal_1_1coalescence_1_1k__ary__tree.html">quetzal::coalescence::k_ary_tree</a></div><div class="ttdef"><b>Definition</b> k_ary_tree.hpp:349</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> newick_parser_2.cpp:12</div></div>
<div class="ttc" id="astructedge__info_html"><div class="ttname"><a href="structedge__info.html">edge_info</a></div><div class="ttdef"><b>Definition</b> geography_dispersal_kernel_4.cpp:13</div></div>
<div class="ttc" id="astructvertex__info_html"><div class="ttname"><a href="structvertex__info.html">vertex_info</a></div><div class="ttdef"><b>Definition</b> coalescence_binary_tree_2.cpp:5</div></div>
</div><!-- fragment --> <h1><a class="anchor" id="ex2"></a>
Output</h1>
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