Merge pull request #361 from RADAR-base/release-0.8.6

Release 0.8.6

.github/workflows/publish_snapshots.yml

@@ -23,7 +23,7 @@ jobs:
 
  - name: Has SNAPSHOT version
  id: is-snapshot
- run: grep 'version = ".*-SNAPSHOT"' build.gradle.kts
+ run: grep 'const val project = ".*-SNAPSHOT"' buildSrc/src/main/kotlin/Versions.kt
 
  - uses: actions/setup-java@v3
  with:

Dockerfile

@@ -1,17 +1,18 @@
-FROM --platform=$BUILDPLATFORM gradle:7.5-jdk17 as builder
+FROM --platform=$BUILDPLATFORM gradle:8.3-jdk17 as builder
 
 RUN mkdir -p /code/java-sdk
 WORKDIR /code/java-sdk
 ENV GRADLE_USER_HOME=/code/.gradlecache \
- GRADLE_OPTS=-Djdk.lang.Process.launchMechanism=vfork
+ GRADLE_OPTS="-Djdk.lang.Process.launchMechanism=vfork -Dorg.gradle.vfs.watch=false"
 
+COPY java-sdk/buildSrc /code/java-sdk/buildSrc
 COPY java-sdk/*.gradle.kts java-sdk/gradle.properties /code/java-sdk/
 COPY java-sdk/radar-schemas-commons/build.gradle.kts /code/java-sdk/radar-schemas-commons/
 COPY java-sdk/radar-schemas-core/build.gradle.kts /code/java-sdk/radar-schemas-core/
 COPY java-sdk/radar-schemas-registration/build.gradle.kts /code/java-sdk/radar-schemas-registration/
 COPY java-sdk/radar-schemas-tools/build.gradle.kts /code/java-sdk/radar-schemas-tools/
 COPY java-sdk/radar-catalog-server/build.gradle.kts /code/java-sdk/radar-catalog-server/
-RUN gradle downloadDependencies copyDependencies startScripts --no-watch-fs
+RUN gradle downloadDependencies copyDependencies startScripts
 
 COPY commons /code/commons
 COPY specifications /code/specifications
@@ -22,7 +23,7 @@ COPY java-sdk/radar-schemas-registration/src /code/java-sdk/radar-schemas-regist
 COPY java-sdk/radar-schemas-tools/src /code/java-sdk/radar-schemas-tools/src
 COPY java-sdk/radar-catalog-server/src /code/java-sdk/radar-catalog-server/src
 
-RUN gradle jar --no-watch-fs
+RUN gradle jar
 
 FROM eclipse-temurin:17-jre
 

commons/connector/fitbit/fitbit_breathing_rate.avsc

@@ -0,0 +1,14 @@
+{
+ "namespace": "org.radarcns.connector.fitbit",
+ "type": "record",
+ "name": "FitbitBreathingRate",
+ "doc": "Breathing rate (BR) data from fitbit device. BR measures the average breathing rate throughout the day and categories your breathing rate by sleep stage. Sleep stages vary between light sleep, deep sleep, REM sleep, and full sleep.",
+ "fields": [
+ { "name": "time", "type": "double", "doc": "Device timestamp in UTC (s)." },
+ { "name": "timeReceived", "type": "double", "doc": "Time that the data was received from the Fitbit API (seconds since the Unix Epoch)." },
+ { "name": "lightSleep", "type": "float", "doc": "Average number of breaths taken per minute when the user was in light sleep."},
+ { "name": "deepSleep", "type": "float", "doc": "Average number of breaths taken per minute when the user was in deep sleep."},
+ { "name": "remSleep", "type": "float", "doc": "Average number of breaths taken per minute when the user was in rem sleep."},
+ { "name": "fullSleep", "type": "float", "doc": "Average number of breaths taken per minute throughout the entire period of sleep which you can compare to the sleep stage-specific measurements."}
+ ]
+}

commons/connector/fitbit/fitbit_intraday_heart_rate_variability.avsc

@@ -0,0 +1,14 @@
+{
+ "namespace": "org.radarcns.connector.fitbit",
+ "type": "record",
+ "name": "FitbitIntradayHeartRateVariability",
+ "doc": "Intra day heart rate variability (HRV) data from fitbit device. HRV data applies specifically to a user’s “main sleep,” which is the longest single period of time asleep on a given date.",
+ "fields": [
+ { "name": "time", "type": "double", "doc": "Device timestamp in UTC (s)." },
+ { "name": "timeReceived", "type": "double", "doc": "Time that the data was received from the Fitbit API (seconds since the Unix Epoch)." },
+ { "name": "rmssd", "type": "float", "doc": "The Root Mean Square of Successive Differences (RMSSD) between heart beats. It measures short-term variability in the user’s heart rate in milliseconds (ms)."},
+ { "name": "coverage", "type": "float", "doc": "Data completeness in terms of the number of interbeat intervals (0-1)."},
+ { "name": "highFrequency", "type": "float", "doc": "The power in interbeat interval fluctuations within the high frequency band (0.15 Hz - 0.4 Hz)."},
+ { "name": "lowFrequency", "type": "float", "doc": "The power in interbeat interval fluctuations within the low frequency band (0.04 Hz - 0.15 Hz)."}
+ ]
+}

commons/connector/fitbit/fitbit_skin_temperature.avsc

@@ -0,0 +1,12 @@
+{
+ "namespace": "org.radarcns.connector.fitbit",
+ "type": "record",
+ "name": "FitbitSkinTemperature",
+ "doc": "Skin temperature (tempSkin) data from fitbit device. tempSkin measures skin temperature data for a date range. It only returns a value for dates on which the Fitbit device was able to record Temperature (skin) data and the maximum date range cannot exceed 30 days. Temperature (Skin) data applies specifically to a user’s “main sleep,” which is the longest single period of time asleep on a given date.",
+ "fields": [
+ { "name": "time", "type": "double", "doc": "Device timestamp in UTC (s)." },
+ { "name": "timeReceived", "type": "double", "doc": "Time that the data was received from the Fitbit API (seconds since the Unix Epoch)." },
+ { "name": "relativeTemperature", "type": "float", "doc": "The user's average temperature during a period of sleep. It is displayed to the user as a delta from their baseline temperature in degrees Celsius."},
+ { "name": "logType", "type": { "name": "FitbitSkinTemperatureLogType", "type": "enum", "symbols": ["DEDICATED_TEMP_SENSOR", "OTHER_SENSORS", "UNKNOWN"], "doc": "The type of skin temperature log created."}, "doc": "The type of skin temperature log created.", "default": "UNKNOWN"}
+ ]
+}

commons/passive/phone/phone_bluetooth_device_scanned.avsc

@@ -0,0 +1,13 @@
+{
+ "namespace": "org.radarcns.passive.phone",
+ "type": "record",
+ "name": "PhoneBluetoothDeviceScanned",
+ "doc": "Phone Bluetooth device info.",
+ "fields": [
+ {"name": "time", "type": "double", "doc": "Device timestamp in UTC (s)."},
+ {"name": "timeReceived", "type": "double", "doc": "Device receiver timestamp in UTC (s)."},
+ {"name": "macAddressHash", "type": ["null", "bytes"], "default": null, "doc":"Hash of Nearby Bluetooth device MAC address."},
+ {"name": "hashSaltReference", "type": ["null", "int"], "doc": "Random identifier associated with the device or installation of the app. If the app gets reinstalled or installed on another device, it's clear during analysis that the mac addresses between iterations are not comparable.", "default": null},
+ {"name": "isPaired", "type": ["null","boolean"], "doc": "Whether the bluetooth device is paired.", "default": null}
+ ]
+}