biocloud_wdl_tools

Central repository for WDL modules used by RTI's cloud-based bioinformatics toolkit

Name		Name	Last commit message	Last commit date
Latest commit History 484 Commits
assign_ancestry_mahalanobis		assign_ancestry_mahalanobis
bcftools		bcftools
bcftools_merge		bcftools_merge
convert_bgen_to_seq_gds		convert_bgen_to_seq_gds
convert_seq_gds_to_snp_gds		convert_seq_gds_to_snp_gds
convert_to_impute2_ids		convert_to_impute2_ids
convert_variant_ids		convert_variant_ids
convert_vcf_to_gds		convert_vcf_to_gds
cov_ldsc		cov_ldsc
flashpca		flashpca
gds_utils		gds_utils
gem		gem
generate_gwas_plots		generate_gwas_plots
genesis		genesis
genomic_sem		genomic_sem
htslib		htslib
king		king
make_gwas_summary_stats		make_gwas_summary_stats
make_metal_command_file		make_metal_command_file
merge_utils		merge_utils
metal-i		metal-i
plink		plink
prepare_imputation_input		prepare_imputation_input
pulmonary_longitudinal_gxe/wdl_v1.1		pulmonary_longitudinal_gxe/wdl_v1.1
rfmix		rfmix
rti-tsv-utils		rti-tsv-utils
rvtests		rvtests
seqarray_tools		seqarray_tools
smartpca		smartpca
split_utils		split_utils
structure		structure
structure_postprocessing		structure_postprocessing
terastructure		terastructure
terastructure_merger		terastructure_merger
terastructure_postprocessing		terastructure_postprocessing
tsv_utils		tsv_utils
utils		utils
.gitignore		.gitignore
README.md		README.md

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