Merge branch 'master' of https://github.com/RuleWorld/nfsim

RuleWorld · Feb 4, 2022 · 3f5bbb7 · 3f5bbb7
2 parents 8adc185 + ccef9bf
commit 3f5bbb7
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Showing 7 changed files with 59 additions and 340 deletions.
diff --git a/.appveyor.yml b/.appveyor.yml
diff --git a/.curl_ftp.sh b/.curl_ftp.sh
diff --git a/.make_tar.pl b/.make_tar.pl
diff --git a/.travis.yml b/.travis.yml
diff --git a/bintray.json b/bintray.json
diff --git a/src/NFinput/NFinput.cpp b/src/NFinput/NFinput.cpp
@@ -2273,15 +2273,10 @@ bool NFinput::initReactionRules(
 					// Add the reactant and product templates to the reaction class
 					r->setAllReactantAndProductTemplates(reactants, products);
 					r->setTotalRateFlag(totalRateFlag);
-
-					// AS-7/1/2021
-					// TODO: Currently I'm tagging every reaction by default
-					// for connectivity calculations. This probably needs
-					// revisited down the line. 
-					if (s->getConnectivityFlag()) {
-						r->tag();
-						s->turnOnTagRxnOutput();
-					}
+					// if (tagFlag) {
+					r->tag();
+					s->turnOnTagRxnOutput();
+					// }
 					// Use reaction connectivity flag
 					// Set to true if given on the command line
 					r->setConnectivityFlag(s->getConnectivityFlag());