Blackened and ruffed

[jkbhagatio]

@coderabbitai: ignore

Summary by CodeRabbit

• Refactor: Improved code readability and maintainability across multiple modules by reordering imports, renaming variables, and updating function signatures.
• Bug Fix: Enhanced error handling in the frames function in aeon/io/video.py to include more detailed information in error messages.
• Documentation: Updated and clarified docstrings for several functions across different modules.
• Style: Standardized string literals and import statements across the codebase for consistency.
• New Feature: Modified the chunk and load functions in aeon/io/api.py to handle both single values and series of timestamps.
• Test: Updated test cases in tests/io/test_api.py to reflect changes in the main codebase.

[github-actions]

CodeRabbit

Commits

Files that changed from the base of the PR and between eb306bd and 0c63c9a commits.

Files selected (35)

• .pre-commit-config.yaml (2)
• aeon/analysis/movies.py (7)
• aeon/analysis/plotting.py (6)
• aeon/analysis/utils.py (4)
• aeon/dj_pipeline/init.py (2)
• aeon/dj_pipeline/acquisition.py (27)
• aeon/dj_pipeline/analysis/in_arena.py (22)
• aeon/dj_pipeline/analysis/visit.py (5)
• aeon/dj_pipeline/device_stream.py (3)
• aeon/dj_pipeline/docs/notebooks/diagram.ipynb (3)
• aeon/dj_pipeline/ingest/create_experiment_01.py (6)
• aeon/dj_pipeline/ingest/create_experiment_02.py (2)
• aeon/dj_pipeline/ingest/create_socialexperiment_0.py (5)
• aeon/dj_pipeline/ingest/load_metadata.py (10)
• aeon/dj_pipeline/ingest/process.py (5)
• aeon/dj_pipeline/lab.py (6)
• aeon/dj_pipeline/qc.py (4)
• aeon/dj_pipeline/report.py (13)
• aeon/dj_pipeline/scripts/clone_and_freeze_exp01.py (2)
• aeon/dj_pipeline/subject.py (2)
• aeon/dj_pipeline/tracking.py (9)
• aeon/dj_pipeline/utils/paths.py (3)
• aeon/dj_pipeline/utils/plotting.py (4)
• aeon/io/api.py (5)
• aeon/io/device.py (2)
• aeon/io/reader.py (5)
• aeon/io/video.py (2)
• aeon/qc/video.py (1)
• aeon/schema/core.py (1)
• aeon/schema/dataset.py (1)
• aeon/schema/foraging.py (2)
• aeon/schema/octagon.py (1)
• aeon/schema/social.py (4)
• aeon/util.py (1)
• tests/io/test_api.py (1)

Files ignored due to filter (1)

• pyproject.toml

Files not summarized due to errors (4)

• aeon/dj_pipeline/acquisition.py (diff tokens exceeds limit)
• aeon/dj_pipeline/analysis/in_arena.py (diff tokens exceeds limit)
• aeon/io/reader.py (diff tokens exceeds limit)
• aeon/schema/octagon.py (diff tokens exceeds limit)

Files skipped from review due to trivial changes (25)

• aeon/analysis/movies.py
• aeon/analysis/utils.py
• aeon/dj_pipeline/init.py
• aeon/dj_pipeline/analysis/visit.py
• aeon/dj_pipeline/device_stream.py
• aeon/dj_pipeline/docs/notebooks/diagram.ipynb
• aeon/dj_pipeline/ingest/create_experiment_02.py
• aeon/dj_pipeline/ingest/create_socialexperiment_0.py
• aeon/dj_pipeline/ingest/process.py
• aeon/dj_pipeline/lab.py
• aeon/dj_pipeline/qc.py
• aeon/dj_pipeline/scripts/clone_and_freeze_exp01.py
• aeon/dj_pipeline/subject.py
• aeon/dj_pipeline/tracking.py
• aeon/dj_pipeline/utils/paths.py
• aeon/dj_pipeline/utils/plotting.py
• aeon/io/api.py
• aeon/io/device.py
• aeon/qc/video.py
• aeon/schema/core.py
• aeon/schema/dataset.py
• aeon/schema/foraging.py
• aeon/schema/social.py
• aeon/util.py
• tests/io/test_api.py

Review comments generated (53)

• Review: 29
• LGTM: 24

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[jkbhagatio]

Note: revert changes to all files within 'aeon/dj_pipeline' - these will be appropriately reformatted in a separate PR