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@ScalableCytometryImageProcessing

Scalable Cytometry Image Processing

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  1. SCIP SCIP Public

    Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs pro…

    Python 7

  2. benchmark benchmark Public

    Benchmark code for SCIP

    Jupyter Notebook

  3. SCIP-use-case-workflows SCIP-use-case-workflows Public

    Snakemake workflows for SCIP use cases.

    Jupyter Notebook 1

Repositories

Showing 7 of 7 repositories
  • SCIP Public

    Scalable Cytometry Image Processing (SCIP) is an open-source tool that implements an image processing pipeline on top of Dask, a distributed computing framework written in Python. SCIP performs projection, illumination correction, image segmentation and masking, and feature extraction.

    ScalableCytometryImageProcessing/SCIP’s past year of commit activity
    Python 7 GPL-3.0 0 13 0 Updated May 22, 2024
  • SCIP-use-case-workflows Public

    Snakemake workflows for SCIP use cases.

    ScalableCytometryImageProcessing/SCIP-use-case-workflows’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 1 0 0 Updated Mar 16, 2023
  • benchmark Public

    Benchmark code for SCIP

    ScalableCytometryImageProcessing/benchmark’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 12, 2022
  • dask Public Forked from dask/dask

    Parallel computing with task scheduling

    ScalableCytometryImageProcessing/dask’s past year of commit activity
    Python 0 BSD-3-Clause 1,757 0 0 Updated Jul 7, 2022
  • dask-mpi Public Forked from dask/dask-mpi

    Deploy Dask using MPI4Py

    ScalableCytometryImageProcessing/dask-mpi’s past year of commit activity
    Python 0 BSD-3-Clause 29 0 0 Updated Jul 4, 2022
  • distributed Public Forked from dask/distributed

    A distributed task scheduler for Dask

    ScalableCytometryImageProcessing/distributed’s past year of commit activity
    Python 0 BSD-3-Clause 730 0 0 Updated Nov 22, 2021
  • dask-jobqueue Public Forked from dask/dask-jobqueue

    Deploy Dask on job schedulers like PBS, SLURM, and SGE

    ScalableCytometryImageProcessing/dask-jobqueue’s past year of commit activity
    Python 0 144 0 0 Updated Sep 2, 2021

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