Add missing coevolve dependency in GitHub workflow #4
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
push: | |
branches: [main, master] | |
pull_request: | |
release: | |
types: [published] | |
workflow_dispatch: | |
name: pkgdown.yaml | |
permissions: read-all | |
jobs: | |
pkgdown: | |
runs-on: ubuntu-latest | |
# Only restrict concurrency for non-PR jobs | |
concurrency: | |
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
permissions: | |
contents: write | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
use-public-rspm: true | |
# As cmdstanr is not yet on CRAN, configure the action to only install the | |
# 'Depends' packages by default and then manually specify the 'Suggests' | |
# packages that are needed | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
dependencies: NA | |
extra-packages: | | |
ape | |
stan-dev/cmdstanr | |
coevolve | |
colorspace | |
dplyr | |
ggdist | |
ggplot2 | |
knitr | |
methods | |
phangorn | |
phaseR | |
pkgdown | |
posterior | |
purrr | |
rcmdcheck | |
readr | |
rlang | |
rmarkdown | |
stringr | |
testthat | |
tidyr | |
withr | |
- name: Build Cmdstan | |
run: | | |
cmdstanr::check_cmdstan_toolchain(fix = TRUE) | |
cmdstanr::install_cmdstan(cores = parallel::detectCores()) | |
shell: Rscript {0} | |
- name: Build site | |
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE) | |
shell: Rscript {0} | |
- name: Deploy to GitHub pages 🚀 | |
if: github.event_name != 'pull_request' | |
uses: JamesIves/github-pages-deploy-action@v4.5.0 | |
with: | |
clean: false | |
branch: main | |
folder: docs |