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A keras-based real-time model for medical image segmentation (CFPNet-M)

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Related paper

CFPNet-M: A Light-Weight Encoder-Decoder Based Network for Multimodal Biomedical Image Real-Time Segmentation

Paper in Arxiv

This repository contains the implementation of a novel light-weight real-time network (CFPNet-Medicine or CFPNet-M) to segment different types of biomedical images. The dataset we used are DRIVE, ISBI-2012, Infrared Breast, CVC-ClinicDB and ISIC 2018.

Architecture of CFPNet-M

CFP module

Result

CFPNet-M

Result

Usage

Prerequisities

The following dependencies are needed:

  • Kearas == 2.2.4
  • Opencv == 3.3.1
  • Tensorflow == 1.10.0
  • Matplotlib == 3.1.3
  • Numpy == 1.19.1

training

You can download the datasets you want to try, and just run: for UNet, DC-UNet, MultiResUNet, ICNet, CFPNet-M, ESPNet and ENet, the code is in the folder network. For Efficient-b0, MobileNet-v2 and Inception-v3, the code is in the main.py. Choose the segmentation model you want to test and run:

main.py

Segmentation Results of Five datasets

In this project, we test five datasets:

  • Infrared Breast Dataset
  • Endoscopy (CVC-ClinicDB)
  • Electron Microscopy (ISBI-2012)
  • Drive (Digital Retinal Image)
  • Dermoscopy (ISIC-2018)
Result
Result
Result
Result
Result
Result_table
Result_table

Speed and FLOPs

The code of test speed and FLOPs are in main.py, you can run them after training.

Result_table

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A keras-based real-time model for medical image segmentation (CFPNet-M)

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