SnPM_test_data

Data for non-regression testing of SnPM

To create test data for a new version of Matlab

1. Clone SnPM test data from https://github.com/SnPM-toolbox/SnPM_test_data. Corresponding folder is denoted by <SNPM_TEST_DATA_PATH> in the following.

2. Clone SnPM from https://github.com/nicholst/SnPM-devel. Corresponding folder is denoted by <SNPM_PATH> in the following.

3. Checkout SnPM8

   $ cd <SNPM_PATH>
   $ git checkout SnPM8 
   

4. In MATLAB, add the path to SPM and SnPM (not done automatically for SnPM8)

   >> addpath('<SPM_PATH>')
   >> addpath('<SNPM_PATH>')
   >> addpath('<SNPM_PATH>/test/')
   

5. In snpm_test_config.m set the testDataDir variable to the path to your SnPM test data folder

   testDataDir = '<SNPM_TEST_DATA_PATH>'; % Specify directory containing test data
   

6. In MATLAB, run

   snpm_test_ground_truth
   

7. A window "check SnPM version" opens and says "Current version of SnPM: SnPM8. Is that okay?", answer "yes".

8. Follow instructions in the MATLAB prompt to create the ground truth data, click "continue" and "done" when prompted.

9. Once tests have finished, make a copy of the onesample_1 folder and rename it onesample_no_ext_in_results and submit all test-generated results folders and files to GitHub.