add ncbi-amrfinderplus 3.11.20 & db 2023-09-26.1 #761
Merged
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added dockerfile for new amrfinder & database versions.
does not build successfully yet, issue in test layerwill fix later unless someone else wants to push a commitTest layer has been fixed, the expected test results files for db release 2023-09-26.1 did not make it into the v3.11.20 release, so I had to manually download those files for the tests. Will revert back for the next dockerfile.
Here's the commit where the 2 files were updated by the authors: ncbi/amr@185a69f
Other than that, the dockerfile is identical to the previous version
Pull Request (PR) checklist:
docker build --tag samtools:1.15test --target test docker-builds/samtools/1.15
)spades/3.12.0/Dockerfile
)shigatyper/2.0.1/test.sh
)spades/3.12.0/README.md
)