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Data Science Lab, University of Bern
- Bern
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napari-roidynamics
napari-roidynamics Publicnapari plugin wrapping the Python package 'roidynamics' into an-easy-to-use interactive tool to analyze the dynamics of intensity in time-lapse microscopy images split into regions of specific geom…
Python 2
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MIA_MyFavouriteTool_NEUBIAS
MIA_MyFavouriteTool_NEUBIAS PublicThis is an examplar workflow to analyze gamma h2ax foci in 2D images. The aim of this workflow is to demonstrate some basic functionalities of the ImageJ plugin ModularImageAnalysis(MIA)
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HCA-to-investigate-senescence
HCA-to-investigate-senescence PublicCellProfiler pipelines used for the analysis of the data published as pre-print "High-content analysis reveals senescence of cultured canine adipose-derived mesenchymal stromal cells to be reversib…
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TidyTuesday
TidyTuesday PublicForked from SheViz-2021/TidyTuesday
Our contributions to "Tidy Tuesday" (https://github.com/rfordatascience/tidytuesday)
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MorphoDynamics
MorphoDynamics PublicForked from guiwitz/MorphoDynamics
A Python package for tracking the deformation of biological cells.
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