LoamStream is a genomic analysis stack featuring a high-level language, compiler and runtime engine.
- Git
- Java 8
- SBT 1.5.0+
- Clone the repository at https://github.com/broadinstitute/dig-loam-stream
- Build a fat jar with
sbt assembly
sbt test
sbt it:test
- This is best done from Jenkins, or at a minimum, from a Broad VM that can submit Uger jobs.
- See [JENKINS.md]
- See [CLI.md] and [LOAM.md]