Apollo CACAO Plugin

A JBrowse plugin for talking to CACAO servers. Plugin consists of a storeClass that lightly wraps the default REST.js implementation with a small change that allows it to function in the context of an Apollo JBrowse environment.

Example configuration

{
	"storeClass" : "CACAO/Store/SeqFeature/REST",
	"type"       : "CACAO/View/Track/CanvasFeatures",
	"label"      : "CACAO",
	"key"        : "CACAO",
	"baseUrl"    : "https://your-server/cacao-backend/jbrowse/",
}

Showcase

Simplified menu due to restricted CACAO functionality

Simplified details page additionally links to respective GO/PMID entries in CACAO

License

AGPL-3.0

Support

This material is based upon work supported by the National Science Foundation under Grant Number (Award 1565146)