Fix typos #3605
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name: CI | |
on: | |
push: | |
schedule: | |
- cron: '0 1 * * *' # Test every day at 1AM | |
jobs: | |
# Based on https://github.com/py-actions/flake8#quick-start | |
flake8-lint: | |
runs-on: ubuntu-latest | |
name: Lint | |
steps: | |
- name: Check out source repository | |
uses: actions/checkout@v3 | |
- name: Set up Python environment | |
uses: actions/setup-python@v4 | |
- name: flake8 Lint | |
uses: py-actions/flake8@v2 | |
with: | |
ignore: "E116,E201,E202,E203,E211,E221,E222,E226,E225,E227,E228,E231,E241,E251,E261,E262,E265,E266,E271,E272,E301,E302,E303,E305,E402,F403,F405,E501,W504,E701,E702,E711,E713,E714,E722,E731,E741,F841,W391,W605" | |
# E116 unexpected indentation (comment) | |
# E201 whitespace after '(' | |
# E202 whitespace before ')' | |
# E203 whitespace before ':' | |
# E211 whitespace before '[' | |
# E221 multiple spaces before operator | |
# E222 multiple spaces after operator | |
# E225 missing whitespace around operator | |
# E226 missing whitespace around arithmetic operator | |
# E227 missing whitespace around bitwise or shift operator | |
# E228 missing whitespace around modulo operator | |
# E231 missing whitespace after ',' | |
# E241 multiple spaces after ',' | |
# E251 unexpected spaces around keyword / parameter equals | |
# E261 at least two spaces before inline comment | |
# E262 inline comment should start with '# ' | |
# E265 block comment should start with '# ' | |
# E266 too many leading '#' for block comment | |
# E271 multiple spaces after keyword | |
# E272 multiple spaces before keyword | |
# E301 expected 1 blank line, found 0 | |
# E302 expected 2 blank lines, found 1 | |
# E303 too many blank lines (3) | |
# E305 expected 2 blank lines after class or function definition, found 1 | |
# E402 module level import not at top of file | |
# F403 unable to detect undefined names | |
# F405 may be undefined, or defined from star imports | |
# E501 line too long | |
# W504 line break after binary operator | |
# E701 multiple statements on one line (colon) | |
# E702 multiple statements on one line | |
# E711 comparison to None should be 'if cond is not None:' | |
# E713 test for membership should be 'not in' | |
# E714 test for object identity should be 'is not' | |
# E722 do not use bare 'except' | |
# E731 do not assign a lambda expression, use a def | |
# E741 ambiguous variable name | |
# F841 local variable is assigned to but never used | |
# W391 blank line at end of file | |
# W605 invalid escape sequence '\s' | |
Full_Analysis: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v2 | |
- name: Add conda to system path | |
run: | | |
echo $CONDA/bin >> $GITHUB_PATH | |
- name: Set Swap Space | |
uses: pierotofy/set-swap-space@49819abfb41bd9b44fb781159c033dba90353a7c | |
with: | |
swap-size-gb: 10 | |
- name: Create conda env and install dependencies | |
run: | | |
conda config --set channel_priority strict | |
conda config --add channels conda-forge | |
conda env create -f environment.yml -n coffea-env | |
conda list -n coffea-env | |
- name: Install local pip packages | |
run: | | |
mkdir dir_for_topcoffea | |
cd dir_for_topcoffea | |
git clone https://github.com/TopEFT/topcoffea.git --branch ch_update | |
cd topcoffea | |
conda run -n coffea-env pip install -e . | |
cd ../.. | |
conda run -n coffea-env pip install -e . | |
- name: Conda list | |
run: | | |
conda list -n coffea-env | |
- name: Install pip packages | |
run: | | |
conda run -n coffea-env pip install xgboost | |
conda run -n coffea-env pip install mt2 | |
conda list -n coffea-env | |
- name: Download root files | |
run: | | |
wget --no-verbose http://www.crc.nd.edu/~kmohrman/files/root_files/for_ci/ttHJet_UL17_R1B14_NAOD-00000_10194_NDSkim.root | |
- name: Pytest setup | |
run: | | |
conda install -y -n coffea-env -c conda-forge pytest pytest-cov root_base | |
mkdir histos | |
- name: Test make 1d quad plots | |
run: | | |
conda run -n coffea-env pytest --cov=./ --cov-report=xml -rP --cov-append tests/test_make_1d_quad_plots.py | |
- name: Run topeft processors over test files with futures executor | |
run: | | |
conda run -n coffea-env pytest --cov=./ --cov-report=xml -rP --cov-append tests/test_futures.py | |
- name: Get topeft yields | |
run: | | |
conda run -n coffea-env pytest --cov=./ --cov-report=xml -rP --cov-append -k test_make_yields_after_processor | |
- name: Compare topeft yields | |
run: | | |
conda run -n coffea-env pytest --cov=./ --cov-report=xml -rP --cov-append -k test_compare_yields_after_processor | |
- name: Run topeft processors over test files with workqueue executor | |
run: | | |
conda run -n coffea-env pytest --cov=./ --cov-report=xml -rP --cov-append tests/test_workqueue.py | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v2 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
directory: ./coverage/reports/ | |
env_vars: OS,PYTHON | |
fail_ci_if_error: true | |
files: ./coverage.xml | |
flags: unittests | |
name: codecov-umbrella | |
verbose: true |