YDA-5660: migrate Docker images to Ubuntu (WIP)

UtrechtUniversity · Apr 26, 2024 · c34872a · c34872a
1 parent 61c1c39
commit c34872a
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diff --git a/docker/hadolint.yml b/docker/hadolint.yml
@@ -1,2 +1,6 @@
 ignored:
+  - DL3008
+  - DL3009
+  - DL3015
+  - DL3025
   - DL3059
diff --git a/docker/images/davrods/Dockerfile b/docker/images/davrods/Dockerfile
@@ -1,4 +1,4 @@
-FROM centos:7
+FROM ubuntu:20.04
 LABEL maintainer="Yoda team <yoda@uu.nl>"
 
 # Network settings
@@ -7,56 +7,87 @@ EXPOSE 443
 
 # Application settings
 ARG TAG=development
-ENV IRODS_VERSION="4.2.12"
-ENV YUM_REPO_FILE_LOC "https://packages.irods.org/renci-irods.yum.repo"
-ENV YUM_IRODS_REPO_SIGNING_KEY_LOC="https://packages.irods.org/irods-signing-key.asc"
-ENV DAVRODS_RPM_URL="https://github.com/UtrechtUniversity/davrods/releases/download/4.2.12_1.5.1/"
-ENV DAVRODS_RPM_PACKAGE="davrods-4.2.12_1.5.1-1.rpm"
+ENV IRODS_PACKAGE_VERSION="4.2.12-1~bionic"
+ENV APT_REPO_CONFIG="deb [arch=amd64] https://packages.irods.org/apt/ bionic main"
+ENV APT_IRODS_REPO_SIGNING_KEY_LOC="https://packages.irods.org/irods-signing-key.asc"
+ENV DAVRODS_APT_URL="https://github.com/UtrechtUniversity/davrods/releases/download/4.2.12_1.5.1"
+ENV DAVRODS_APT_PACKAGE="davrods-4.2.12-1.5.1.deb"
+ENV DEBIAN_FRONTEND="noninteractive"
+
+# Update packages
+RUN apt-get update
 
 # Install common tools
 # hadolint ignore=DL3033
-RUN yum install -y epel-release wget && \
-    yum clean all
+RUN apt-get install -y wget
+
+# Install Python 3
+# hadolint ignore=DL3033
+RUN apt-get install -y gcc python3 python3-dev python3-pip python3-virtualenv \
+                       python3-wheel python3.8-venv
 
 # Install and configure Apache
 # hadolint ignore=DL3033
-RUN yum -y install httpd httpd-devel mod_ssl openssl && yum clean all
-RUN rm /etc/httpd/conf.d/autoindex.conf /etc/httpd/conf.modules.d/00-lua.conf
-COPY httpd.conf /etc/httpd/conf/httpd.conf
-COPY ssl.conf /etc/httpd/conf.d/ssl.conf
+RUN apt-get install -y apache2 apache2-dev openssl
+RUN ln -s /etc/apache2/mods-available/headers.load /etc/apache2/mods-enabled/headers.load
+COPY apache2.conf /etc/apache2/apache2.conf
+COPY ssl.conf /etc/apache2/mods-available/ssl.conf
+RUN ln -s /etc/apache2/mods-available/ssl.load /etc/apache2/mods-enabled/ssl.load
+RUN ln -s /etc/apache2/mods-available/dav.load /etc/apache2/mods-enabled/dav.load
+RUN ln -s /etc/apache2/mods-available/dav_fs.load /etc/apache2/mods-enabled/dav_fs.load
+RUN ln -s /etc/apache2/mods-available/dav_lock.load /etc/apache2/mods-enabled/dav_lock.load
+RUN ln -s /etc/apache2/mods-available/davrods.load /etc/apache2/mods-enabled/davrods.load
 
+# Install iRODS dependencies
+RUN apt-get -y install aptitude libboost-locale-dev libpython2-stdlib libpython2.7-minimal \
+          libpython2.7-stdlib \
+          python-is-python2 python-six python2 python2-minimal python2.7 python2.7-minimal \
+          python-certifi python-chardet python-idna python-pkg-resources python-setuptools
+ENV PY_URLLIB_PREFIX="http://security.ubuntu.com/ubuntu/pool/main/p/python-urllib3"
+ENV PY_URLLIB_FILENAME="python-urllib3_1.22-1ubuntu0.18.04.2_all.deb"
+ENV PY_REQUESTS_PREFIX="http://security.ubuntu.com/ubuntu/pool/main/r/requests"
+ENV PY_REQUESTS_FILENAME="python-requests_2.18.4-2ubuntu0.1_all.deb"
+ENV OPENSSL_PREFIX="http://security.ubuntu.com/ubuntu/pool/main/o/openssl1.0"
+ENV OPENSSL_FILENAME="libssl1.0.0_1.0.2n-1ubuntu5.13_amd64.deb"
+RUN wget -q ${PY_URLLIB_PREFIX}/${PY_URLLIB_FILENAME} && \
+    wget -q ${PY_REQUESTS_PREFIX}/${PY_REQUESTS_FILENAME} && \
+    wget -q ${OPENSSL_PREFIX}/${OPENSSL_FILENAME} && \
+    dpkg -i ${PY_URLLIB_FILENAME} && \
+    dpkg -i ${PY_REQUESTS_FILENAME} && \
+    dpkg -i ${OPENSSL_FILENAME} && \
+    rm ${PY_URLLIB_FILENAME} && \
+    rm ${PY_REQUESTS_FILENAME} && \
+    rm ${OPENSSL_FILENAME}
+
 # Install iRODS components: iCommands and runtime
 SHELL ["/bin/bash", "-o", "pipefail", "-c"]
 # hadolint ignore=DL3033
-RUN yum install -y epel-release wget git && \
-    yum clean all && \
-    useradd -d /var/lib/irods irods && \
-    rpm --import "$YUM_IRODS_REPO_SIGNING_KEY_LOC" && \
-    yum update -y ca-certificates && \
-    wget -qO - "$YUM_REPO_FILE_LOC" | tee /etc/yum.repos.d/renci-irods.yum.repo && \
-    yum -y update && \
-    for package in irods-runtime irods-icommands ; \
-    do echo "Installing package ${package} and its dependencies ..."; \
-       yum -y install "$package-${IRODS_VERSION}"  && yum clean all; \
-    done && \
-    yum clean all
+RUN useradd -d /var/lib/irods irods && \
+    wget -qO - "$APT_IRODS_REPO_SIGNING_KEY_LOC" | apt-key add - && \
+    echo "$APT_REPO_CONFIG" | tee /etc/apt/sources.list.d/irods.list && \
+    apt-get update && \
+    apt-cache policy irods-runtime && \
+    apt-cache policy irods-icommands && \
+    apt-get -y install irods-runtime=${IRODS_PACKAGE_VERSION} irods-icommands=${IRODS_PACKAGE_VERSION}
 
 # Install DavRODS and its dependencies
 # hadolint ignore=DL3033
-RUN yum -y install boost jansson && yum clean all && \
+RUN apt-get -y install libboost-all-dev libjansson4 && \
     mkdir /download && \
-    wget -q "$DAVRODS_RPM_URL/$DAVRODS_RPM_PACKAGE" -O "/download/$DAVRODS_RPM_PACKAGE" && \
-    rpm -ivh "/download/$DAVRODS_RPM_PACKAGE"
+    wget -q "$DAVRODS_APT_URL/$DAVRODS_APT_PACKAGE" -O "/download/$DAVRODS_APT_PACKAGE" && \
+    dpkg -i "/download/$DAVRODS_APT_PACKAGE"
 
 # Copy DavRODS VHost and iRODS configuration files
-COPY davrods-vhost.conf /etc/httpd/conf.d/davrods-vhost.conf
-COPY davrods-anonymous-vhost.conf /etc/httpd/conf.d/davrods-anonymous-vhost.conf
-COPY irods_environment.json /etc/httpd/irods/irods_environment.json
+COPY davrods-vhost.conf /etc/apache2/stes-available/davrods-vhost.conf
+COPY davrods-anonymous-vhost.conf /etc/apache2/sites-available/davrods-anonymous-vhost.conf
+RUN ln -s /etc/apache2/sites-available/davrods-vhost.conf /etc/apache2/sites-enabled/davrods-vhost.conf
+RUN ln -s /etc/apache2/sites-available/davrods-anonymous-vhost.conf /etc/apache2/sites-enabled/davrods-anonymous-vhost.conf
+COPY irods_environment.json /etc/apache2/irods/irods_environment.json
 
 # Copy DavRODS theming files
-COPY header.html /etc/httpd/irods/header.html
-COPY head.html /etc/httpd/irods/head.html
-COPY footer.html /etc/httpd/irods/footer.html
+COPY header.html /etc/apache2/irods/header.html
+COPY head.html /etc/apache2/irods/head.html
+COPY footer.html /etc/apache2/irods/footer.html
 
 # Initialize
 VOLUME [ "/sys/fs/cgroup" ]