Skip to content

Commit

Permalink
Updated manual (mainly part about Geneious usage), version 1.3 released.
Browse files Browse the repository at this point in the history
  • Loading branch information
V-Z committed Dec 18, 2017
1 parent 9e3fa86 commit 2c33ee7
Show file tree
Hide file tree
Showing 7 changed files with 93 additions and 71 deletions.
4 changes: 2 additions & 2 deletions .info
Original file line number Diff line number Diff line change
@@ -1,2 +1,2 @@
CURRENTVERSION=1.2
NEWVERSION=https://github.com/V-Z/sondovac/releases/download/v1.2/sondovac-1.2.zip
CURRENTVERSION=1.3
NEWVERSION=https://github.com/V-Z/sondovac/releases/download/v1.3/sondovac-1.3.zip
9 changes: 6 additions & 3 deletions CHANGELOG
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ Sondovač changelog
Sondovač is a script to create orthologous low-copy nuclear probes from
transcriptome and genome skim data for target enrichment.

Version 1.3 regular release released YYYY-MM-DD
Version 1.3 regular release released 2017-12-18
================================================================================

* bam2fastq is dropped in favour of samtools fastq. No plans to use Picard
Expand All @@ -14,11 +14,14 @@ Version 1.3 regular release released YYYY-MM-DD
B), list of all probes (with putative plastid sequences) and list of putative
plastid sequences are available.
* Updated software distributed with Sondovač, updated respective sections of
manual.
PDF manual.
* Removed FASTX Toolkit, conversion from FASTQ to FASTA is done by simple shell
function.
* Improved handling of input/output files when stored in more different
* Improved handling of input/output files when stored in several different
directories.
* Tested with Geneious 10, improved description of Geneious usage in the PDF
manual.
* Improved PDF manual.


Version 1.2 regular release released 2016-06-28
Expand Down
Binary file added manual/geneious5.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file added manual/geneious6.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified manual/sondovac_manual.pdf
Binary file not shown.
149 changes: 84 additions & 65 deletions manual/sondovac_manual.tex

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion sondovac_functions
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@

# Version of the script
SCRIPTVERSION=1.3
RELEASEDATE=2017-MM-DD
RELEASEDATE=2017-12-18
# Web page of the script
WEB="https://github.com/V-Z/sondovac/"

Expand Down

0 comments on commit 2c33ee7

Please sign in to comment.