Updates to cp_df_als add AtA to make faster #419
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| name: Linux/MacOS Build | |
| on: [push, pull_request] | |
| #env: | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| build_type : [ Release, Debug ] | |
| os : [ macos-latest, ubuntu-20.04 ] | |
| linalg : [netlib, vendor] | |
| include: | |
| - os: ubuntu-20.04 | |
| cxx: /usr/bin/g++-9 | |
| - os: macos-latest | |
| cxx: clang++ | |
| name: "${{ matrix.os }}: ${{ matrix.cxx }} ${{ matrix.build_type }} linalg=${{ matrix.linalg }}" | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| CXX : ${{ matrix.cxx }} | |
| DOXYGEN_VERSION : 1.9.2 | |
| CCACHE_DIR : ${{github.workspace}}/build/.ccache | |
| CCACHE_COMPRESS : true | |
| CCACHE_COMPRESSLEVEL : 6 | |
| BUILD_CONFIG : > | |
| -G Ninja | |
| -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} | |
| -DCMAKE_PREFIX_PATH=/usr/local/opt/bison | |
| -DBUILD_SHARED_LIBS=OFF | |
| -DMPIEXEC_PREFLAGS='--bind-to;none;--allow-run-as-root' | |
| -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/install | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Create Build Environment | |
| # Some projects don't allow in-source building, so create a separate build directory | |
| # We'll use this as our working directory for all subsequent commands | |
| run: cmake -E make_directory ${{github.workspace}}/build | |
| - name: Install prerequisite MacOS packages | |
| if: ${{ matrix.os == 'macos-latest' }} | |
| run: | | |
| brew install ninja gcc@10 boost eigen open-mpi bison ccache | |
| # install Netlib if want generic linalg | |
| if [ "${{matrix.linalg}}" = "netlib" ]; then | |
| brew install lapack | |
| echo "BLAS_PREFERENCE_LIST=ReferenceBLAS" >> $GITHUB_ENV | |
| else | |
| echo "BLAS_PREFERENCE_LIST=Accelerate" >> $GITHUB_ENV | |
| fi | |
| - name: Install prerequisites Ubuntu packages | |
| if: ${{ matrix.os == 'ubuntu-20.04' }} | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install ninja-build g++-9 liblapack-dev libboost-dev libboost-serialization-dev libboost-random-dev libeigen3-dev openmpi-bin libopenmpi-dev libtbb-dev ccache | |
| if [ "${{matrix.build_type}}" = "Release" ]; then | |
| sudo apt-get install libclang1-9 libclang-cpp9 graphviz fonts-liberation | |
| cd ${{github.workspace}}/build | |
| # If we fail getting doxygen-${DOXYGEN_VERSION}.linux.bin.tar.gz from sourceforge, | |
| # use EFV's gdrive mirror of 1.9.2 to work around the unreliable sourceforge | |
| # the sharing link: https://drive.google.com/file/d/16GXpH4YOEUxGXQrXOKdAIibhdfzATY0d/view?usp=sharing | |
| wget https://downloads.sourceforge.net/project/doxygen/rel-${DOXYGEN_VERSION}/doxygen-${DOXYGEN_VERSION}.linux.bin.tar.gz || wget -4 --no-check-certificate -O doxygen-${DOXYGEN_VERSION}.linux.bin.tar.gz "https://drive.google.com/uc?export=download&id=16GXpH4YOEUxGXQrXOKdAIibhdfzATY0d" | |
| tar xzf ./doxygen-${DOXYGEN_VERSION}.linux.bin.tar.gz | |
| export DOXYGEN_DIR=${{github.workspace}}/build/doxygen-${DOXYGEN_VERSION} | |
| ${DOXYGEN_DIR}/bin/doxygen --version | |
| # doxygen should be in PATH in subsequent steps | |
| echo "${DOXYGEN_DIR}/bin" >> $GITHUB_PATH | |
| fi | |
| # install MKL if want vendor linalg | |
| if [ "${{matrix.linalg}}" = "vendor" ]; then | |
| sudo sh -c 'wget -O - https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | gpg --dearmor > /usr/share/keyrings/oneapi-archive-keyring.gpg' | |
| sudo sh -c 'echo "deb [signed-by=/usr/share/keyrings/oneapi-archive-keyring.gpg] https://apt.repos.intel.com/oneapi all main" > /etc/apt/sources.list.d/oneAPI.list' | |
| sudo apt-get -yq update | |
| sudo apt-get install intel-oneapi-mkl-devel | |
| echo "BLAS_PREFERENCE_LIST=IntelMKL" >> $GITHUB_ENV | |
| echo "MKLROOT=/opt/intel/oneapi/mkl/latest" >> $GITHUB_ENV | |
| echo "MKL_NUM_THREADS=1" >> $GITHUB_ENV | |
| else | |
| echo "BLAS_PREFERENCE_LIST=ReferenceBLAS" >> $GITHUB_ENV | |
| fi | |
| - name: Prepare ccache timestamp | |
| id: ccache_cache_timestamp | |
| shell: cmake -P {0} | |
| run: | | |
| string(TIMESTAMP current_date "%Y-%m-%d-%H;%M;%S" UTC) | |
| message("::set-output name=timestamp::${current_date}") | |
| - name: Setup ccache cache files | |
| uses: actions/cache@v1.1.0 | |
| with: | |
| path: ${{github.workspace}}/build/.ccache | |
| key: ${{ matrix.config.name }}-ccache-${{ steps.ccache_cache_timestamp.outputs.timestamp }} | |
| restore-keys: | | |
| ${{ matrix.config.name }}-ccache- | |
| - name: Configure CMake | |
| # Use a bash shell so we can use the same syntax for environment variable | |
| # access regardless of the host operating system | |
| shell: bash | |
| working-directory: ${{github.workspace}}/build | |
| # Note the current convention is to use the -S and -B options here to specify source | |
| # and build directories, but this is only available with CMake 3.13 and higher. | |
| # The CMake binaries on the Github Actions machines are (as of this writing) 3.12 | |
| run: | | |
| cmake $GITHUB_WORKSPACE -DCMAKE_BUILD_TYPE=$BUILD_TYPE -DBLAS_PREFERENCE_LIST=$BLAS_PREFERENCE_LIST $BUILD_CONFIG | |
| - name: Build | |
| working-directory: ${{github.workspace}}/build | |
| shell: bash | |
| # Execute the build. You can specify a specific target with "--target <NAME>" | |
| run: ccache -p && ccache -z && cmake --build . && ccache -s | |
| - name: Test | |
| working-directory: ${{github.workspace}}/build | |
| shell: bash | |
| # Execute tests defined by the CMake configuration. | |
| # See https://cmake.org/cmake/help/latest/manual/ctest.1.html for more detail | |
| # run: ctest -C $BUILD_TYPE | |
| run: cmake --build . --target check-btas | |
| - name: Install | |
| working-directory: ${{github.workspace}}/build | |
| shell: bash | |
| run: cmake --build . --target install | |
| - name: Test Install Tree | |
| working-directory: ${{github.workspace}}/build | |
| shell: bash | |
| run: | | |
| cmake -S $GITHUB_WORKSPACE/doc/examples -B test_install -DCMAKE_PREFIX_PATH=${{github.workspace}}/install | |
| cmake --build test_install | |
| - name: Build+Deploy Dox | |
| if: ${{ matrix.os == 'ubuntu-20.04' && matrix.build_type == 'Release' && github.ref == 'refs/heads/master' }} | |
| working-directory: ${{github.workspace}}/build | |
| shell: bash | |
| run: | | |
| #echo "== deploying dox ==" | |
| #git config --global user.email "eduard@valeyev.net" | |
| #git config --global user.name "GitHub Actions" | |
| cmake --build . --target html | |
| #git clone --depth=1 https://github.com/ValeevGroup/BTAS.git --branch gh-pages --single-branch btas-docs-current | |
| #git clone --depth=1 https://github.com/ValeevGroup/BTAS.git --branch gh-pages-template --single-branch btas-docs-template |