feat: download foldseek in the docker

Venom-Biochem-Lab · Feb 1, 2024 · 2744e37 · 2744e37
1 parent 71df2cd
commit 2744e37
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Showing 2 changed files with 8 additions and 1 deletion.
diff --git a/backend/.gitignore b/backend/.gitignore
@@ -1,2 +1,6 @@
 __pycache__/
-.venv
+.venv
+.foldseek_cache/
+foldseek/bin/foldseek
+foldseek/README.md
+foldseek-linux-sse2.tar.gz
diff --git a/backend/Dockerfile b/backend/Dockerfile
@@ -10,4 +10,7 @@ RUN poetry config virtualenvs.in-project true
 
 RUN poetry install
 
+RUN wget https://mmseqs.com/foldseek/foldseek-linux-sse2.tar.gz && tar xvzf foldseek-linux-sse2.tar.gz
+RUN rm -f foldseek-linux-sse2.tar.gz
+
 EXPOSE 8000