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WayScience · Sep 3, 2024 · ae92e66 · ae92e66
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diff --git a/main/.buildinfo b/main/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 1b3da61a8ade8e641688f68c8253dd31
+config: 81a490b246cd7051bcad1d9ab1fae8c1
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/main/.doctrees/code_of_conduct.doctree b/main/.doctrees/code_of_conduct.doctree
diff --git a/main/.doctrees/contributing.doctree b/main/.doctrees/contributing.doctree
diff --git a/main/.doctrees/environment.pickle b/main/.doctrees/environment.pickle
diff --git a/main/.doctrees/examples.doctree b/main/.doctrees/examples.doctree
diff --git a/main/.doctrees/examples/cosmicqc_in_a_nutshell.doctree b/main/.doctrees/examples/cosmicqc_in_a_nutshell.doctree
diff --git a/main/.doctrees/index.doctree b/main/.doctrees/index.doctree
diff --git a/main/.doctrees/python-api.doctree b/main/.doctrees/python-api.doctree
diff --git a/main/_modules/index.html b/main/_modules/index.html
@@ -24,7 +24,7 @@
         <a class="btn btn-sm btn-light skip-to-content-link" href="#main">Skip to content</a>
         <div class="container-fluid">
             <div class="navbar navbar-expand-lg navbar-dark font-weight-bold">
-                    <a href="/"
+                    <a href="https://wayscience.github.io/coSMicQC"
                         title="coSMicQC logo"
                         class="logo navbar-brand"
                     >
@@ -35,6 +35,16 @@
                     </a>
 
 
+                    <div class="collapse navbar-collapse justify-content-end">
+                        <ul class="navbar-nav">
+
+
+
+                                <li class="nav-item"><a class="nav-link"  href="https://github.com/WayScience/coSMicQC"><span class='fab fa-github'></span> GitHub Repository</a></li>
+
+                        </ul>
+                    </div>
+
                 <button class="navbar-toggler btn btn-primary d-lg-none" type="button" data-toggle="collapse" data-target="#collapseSidebar" aria-expanded="false" aria-controls="collapseExample">
                     <span class="navbar-toggler-icon"></span>
                     <span class="sr-only">menu</span>
@@ -157,7 +167,7 @@ <h4>Versions</h4>
                             <span class="dark-only"><i class="fas fa-sun"></i> Light mode</span>
                             <span class="light-only"><i class="fas fa-moon"></i> Dark mode</span>
                         </button>
-    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/docs/src_modules/index" rel="nofollow">
+    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/tree/main/docs/src_modules/index" rel="nofollow">
         <span class="btn-icon"><span class="fab fa-github"></span></span>
         <span class="btn-text">Edit on GitHub</span>
     </a>
@@ -199,27 +209,11 @@ <h1>All modules for which code is available</h1>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/features/">Features</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/about-wagtail/"> About Wagtail</a></li>
-
-
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-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/services/"> Services</a></li>
-
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-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/blog/"> Blog</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/packages/"> Packages</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://www.waysciencelab.com/">Way Lab</a></li>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/developers/"> Developers</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://github.com/WayScience/coSMicQC">coSMicQC GitHub Repository</a></li>
 
                     </ul>
                 </nav>

diff --git a/main/_modules/src/cosmicqc/analyze.html b/main/_modules/src/cosmicqc/analyze.html
@@ -25,7 +25,7 @@
         <a class="btn btn-sm btn-light skip-to-content-link" href="#main">Skip to content</a>
         <div class="container-fluid">
             <div class="navbar navbar-expand-lg navbar-dark font-weight-bold">
-                    <a href="/"
+                    <a href="https://wayscience.github.io/coSMicQC"
                         title="coSMicQC logo"
                         class="logo navbar-brand"
                     >
@@ -36,6 +36,16 @@
                     </a>
 
 
+                    <div class="collapse navbar-collapse justify-content-end">
+                        <ul class="navbar-nav">
+
+
+
+                                <li class="nav-item"><a class="nav-link"  href="https://github.com/WayScience/coSMicQC"><span class='fab fa-github'></span> GitHub Repository</a></li>
+
+                        </ul>
+                    </div>
+
                 <button class="navbar-toggler btn btn-primary d-lg-none" type="button" data-toggle="collapse" data-target="#collapseSidebar" aria-expanded="false" aria-controls="collapseExample">
                     <span class="navbar-toggler-icon"></span>
                     <span class="sr-only">menu</span>
@@ -159,7 +169,7 @@ <h4>Versions</h4>
                             <span class="dark-only"><i class="fas fa-sun"></i> Light mode</span>
                             <span class="light-only"><i class="fas fa-moon"></i> Dark mode</span>
                         </button>
-    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/docs/src_modules/src/cosmicqc/analyze" rel="nofollow">
+    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/tree/main/docs/src_modules/src/cosmicqc/analyze" rel="nofollow">
         <span class="btn-icon"><span class="fab fa-github"></span></span>
         <span class="btn-text">Edit on GitHub</span>
     </a>
@@ -587,27 +597,11 @@ <h1>Source code for src.cosmicqc.analyze</h1><div class="highlight"><pre>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/features/">Features</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/about-wagtail/"> About Wagtail</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/services/"> Services</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/blog/"> Blog</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/packages/"> Packages</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://www.waysciencelab.com/">Way Lab</a></li>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/developers/"> Developers</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://github.com/WayScience/coSMicQC">coSMicQC GitHub Repository</a></li>
 
                     </ul>
                 </nav>

diff --git a/main/_modules/src/cosmicqc/cli.html b/main/_modules/src/cosmicqc/cli.html
@@ -25,7 +25,7 @@
         <a class="btn btn-sm btn-light skip-to-content-link" href="#main">Skip to content</a>
         <div class="container-fluid">
             <div class="navbar navbar-expand-lg navbar-dark font-weight-bold">
-                    <a href="/"
+                    <a href="https://wayscience.github.io/coSMicQC"
                         title="coSMicQC logo"
                         class="logo navbar-brand"
                     >
@@ -36,6 +36,16 @@
                     </a>
 
 
+                    <div class="collapse navbar-collapse justify-content-end">
+                        <ul class="navbar-nav">
+
+
+
+                                <li class="nav-item"><a class="nav-link"  href="https://github.com/WayScience/coSMicQC"><span class='fab fa-github'></span> GitHub Repository</a></li>
+
+                        </ul>
+                    </div>
+
                 <button class="navbar-toggler btn btn-primary d-lg-none" type="button" data-toggle="collapse" data-target="#collapseSidebar" aria-expanded="false" aria-controls="collapseExample">
                     <span class="navbar-toggler-icon"></span>
                     <span class="sr-only">menu</span>
@@ -159,7 +169,7 @@ <h4>Versions</h4>
                             <span class="dark-only"><i class="fas fa-sun"></i> Light mode</span>
                             <span class="light-only"><i class="fas fa-moon"></i> Dark mode</span>
                         </button>
-    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/docs/src_modules/src/cosmicqc/cli" rel="nofollow">
+    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/tree/main/docs/src_modules/src/cosmicqc/cli" rel="nofollow">
         <span class="btn-icon"><span class="fab fa-github"></span></span>
         <span class="btn-text">Edit on GitHub</span>
     </a>
@@ -318,27 +328,11 @@ <h1>Source code for src.cosmicqc.cli</h1><div class="highlight"><pre>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/features/">Features</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/about-wagtail/"> About Wagtail</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/services/"> Services</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/blog/"> Blog</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/packages/"> Packages</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://www.waysciencelab.com/">Way Lab</a></li>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/developers/"> Developers</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://github.com/WayScience/coSMicQC">coSMicQC GitHub Repository</a></li>
 
                     </ul>
                 </nav>

diff --git a/main/_modules/src/cosmicqc/frame.html b/main/_modules/src/cosmicqc/frame.html
@@ -25,7 +25,7 @@
         <a class="btn btn-sm btn-light skip-to-content-link" href="#main">Skip to content</a>
         <div class="container-fluid">
             <div class="navbar navbar-expand-lg navbar-dark font-weight-bold">
-                    <a href="/"
+                    <a href="https://wayscience.github.io/coSMicQC"
                         title="coSMicQC logo"
                         class="logo navbar-brand"
                     >
@@ -36,6 +36,16 @@
                     </a>
 
 
+                    <div class="collapse navbar-collapse justify-content-end">
+                        <ul class="navbar-nav">
+
+
+
+                                <li class="nav-item"><a class="nav-link"  href="https://github.com/WayScience/coSMicQC"><span class='fab fa-github'></span> GitHub Repository</a></li>
+
+                        </ul>
+                    </div>
+
                 <button class="navbar-toggler btn btn-primary d-lg-none" type="button" data-toggle="collapse" data-target="#collapseSidebar" aria-expanded="false" aria-controls="collapseExample">
                     <span class="navbar-toggler-icon"></span>
                     <span class="sr-only">menu</span>
@@ -159,7 +169,7 @@ <h4>Versions</h4>
                             <span class="dark-only"><i class="fas fa-sun"></i> Light mode</span>
                             <span class="light-only"><i class="fas fa-moon"></i> Dark mode</span>
                         </button>
-    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/docs/src_modules/src/cosmicqc/frame" rel="nofollow">
+    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/tree/main/docs/src_modules/src/cosmicqc/frame" rel="nofollow">
         <span class="btn-icon"><span class="fab fa-github"></span></span>
         <span class="btn-text">Edit on GitHub</span>
     </a>
@@ -1105,27 +1115,11 @@ <h1>Source code for src.cosmicqc.frame</h1><div class="highlight"><pre>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/features/">Features</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/about-wagtail/"> About Wagtail</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/services/"> Services</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/blog/"> Blog</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/packages/"> Packages</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://www.waysciencelab.com/">Way Lab</a></li>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/developers/"> Developers</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://github.com/WayScience/coSMicQC">coSMicQC GitHub Repository</a></li>
 
                     </ul>
                 </nav>

diff --git a/main/_modules/src/cosmicqc/image.html b/main/_modules/src/cosmicqc/image.html
@@ -25,7 +25,7 @@
         <a class="btn btn-sm btn-light skip-to-content-link" href="#main">Skip to content</a>
         <div class="container-fluid">
             <div class="navbar navbar-expand-lg navbar-dark font-weight-bold">
-                    <a href="/"
+                    <a href="https://wayscience.github.io/coSMicQC"
                         title="coSMicQC logo"
                         class="logo navbar-brand"
                     >
@@ -36,6 +36,16 @@
                     </a>
 
 
+                    <div class="collapse navbar-collapse justify-content-end">
+                        <ul class="navbar-nav">
+
+
+
+                                <li class="nav-item"><a class="nav-link"  href="https://github.com/WayScience/coSMicQC"><span class='fab fa-github'></span> GitHub Repository</a></li>
+
+                        </ul>
+                    </div>
+
                 <button class="navbar-toggler btn btn-primary d-lg-none" type="button" data-toggle="collapse" data-target="#collapseSidebar" aria-expanded="false" aria-controls="collapseExample">
                     <span class="navbar-toggler-icon"></span>
                     <span class="sr-only">menu</span>
@@ -159,7 +169,7 @@ <h4>Versions</h4>
                             <span class="dark-only"><i class="fas fa-sun"></i> Light mode</span>
                             <span class="light-only"><i class="fas fa-moon"></i> Dark mode</span>
                         </button>
-    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/docs/src_modules/src/cosmicqc/image" rel="nofollow">
+    <a class="btn btn-sm btn-light text-decoration-none" href="https://github.com/WayScience/coSMicQC/tree/main/docs/src_modules/src/cosmicqc/image" rel="nofollow">
         <span class="btn-icon"><span class="fab fa-github"></span></span>
         <span class="btn-text">Edit on GitHub</span>
     </a>
@@ -269,27 +279,11 @@ <h1>Source code for src.cosmicqc.image</h1><div class="highlight"><pre>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/features/">Features</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/about-wagtail/"> About Wagtail</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/services/"> Services</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/blog/"> Blog</a></li>
-
-
-
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/packages/"> Packages</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://www.waysciencelab.com/">Way Lab</a></li>
 
 
 
-                            <li class="nav-item"><a class="nav-link text-light"  href="https://wagtail.org/developers/"> Developers</a></li>
+                            <li class="nav-item"><a class="nav-link text-light"  href="https://github.com/WayScience/coSMicQC">coSMicQC GitHub Repository</a></li>
 
                     </ul>
                 </nav>