update

XWangLabTHU · Jul 19, 2021 · f1e8108 · f1e8108
1 parent 609e49d
commit f1e8108
Show file tree

Hide file tree

Showing 3 changed files with 6 additions and 1 deletion.
diff --git a/ARIC/deconvolution.py b/ARIC/deconvolution.py
@@ -52,6 +52,8 @@ def ARIC(
  if selected_marker:
  tmppath = os.path.splitext(mix_path)[0]
  os.makedirs(tmppath, exist_ok=True)
+ else:
+ tmppath = None
 
  raw_markers = list(ref.index)
  cell_type = ref.columns.values

diff --git a/README.rst b/README.rst
@@ -5,3 +5,6 @@ Accurate and robust inference of cell type proportions from bulk gene expression
 version 0.0.1, 2021.06.18
 The first test version.
 
+version 0.1.0, 2021.07.16
+Add function to output all the markers.
+
diff --git a/setup.py b/setup.py
@@ -17,7 +17,7 @@ def read(fname):
 
 setup(
  name="ARIC",
- version="0.0.1",
+ version="0.1.0",
  keywords=("pip", "ARIC"),
  description="ARIC: Accurate and robust inference of cell type proportions from bulk gene expression or DNA methylation data",
  license="GPL V3",