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Add alias and concept-id redirect files for superdataset, TMS-DTI-ALS…
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…, and GAD-AINS-sc-Seq
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@jsheunis
jsheunis committed Jun 6, 2024
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264 changes: 263 additions & 1 deletion ...e71673a41/5344fdc107357bdf7f5bfbcf39c8870ed517fd54/468/8a53436c1377c1c5fc97c2bc931b3.json
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{"type": "dataset", "dataset_id": "1015ed7c-0a3d-4dfc-9c4f-11fe71673a41", "dataset_version": "5344fdc107357bdf7f5bfbcf39c8870ed517fd54", "children": [{"type": "directory", "name": "FZJ", "path": "FZJ"}, {"type": "directory", "name": "UKD", "path": "UKD"}], "metadata_sources": {"key_source_map": {"type": ["catalog_core"], "dataset_id": ["catalog_core"], "dataset_version": ["catalog_core"], "url": ["catalog_core", "tabby"], "authors": ["tabby"], "name": ["tabby"], "description": ["tabby"], "keywords": ["tabby"], "funding": ["tabby"], "subdatasets": ["tabby"], "additional_display": ["tabby"]}, "sources": [{"source_name": "catalog_core", "source_version": "1", "source_parameter": {}, "source_time": 1717677095.963958, "agent_email": "s.heunis@fz-juelich.de", "agent_name": "Stephan Heunis"}, {"source_name": "tabby", "source_version": "0.1.0", "source_parameter": {}, "source_time": 1717677095.999763, "agent_name": "Stephan Heunis", "agent_email": "s.heunis@fz-juelich.de"}]}, "url": ["https://www.abcd-j.de/", "https://github.com/abcd-j/data.git"], "authors": [{"name": "ABCD-J Research Consortium"}], "name": "The ABCD-J Data Catalog", "description": "This data catalog contains datasets from the ABCD-J research community project, officially titled \u201cVerbundprojekt: Accessing Behavior for Clinical Data and Joint usage (ABCD-J) - Eine Plattform f\u00fcr Verhaltensmarker der digitalen Neuromedizin in NRW\u201d. This project is a collaboration between five research institutions in the German state of North Rhine-Westphalia: University Clinic RWTH Aachen, University Clinic Bonn, University Clinic K\u00f6ln, University Clinic D\u00fcsseldorf and Research Centre J\u00fclich. The overarching goal of ABCD-J is to elevate existing technical solutions for research practice adoption. 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{
"type": "dataset",
"dataset_id": "1015ed7c-0a3d-4dfc-9c4f-11fe71673a41",
"dataset_version": "5344fdc107357bdf7f5bfbcf39c8870ed517fd54",
"children": [
{
"type": "directory",
"name": "FZJ",
"path": "FZJ"
},
{
"type": "directory",
"name": "UKD",
"path": "UKD"
}
],
"metadata_sources": {
"key_source_map": {
"type": [
"catalog_core"
],
"dataset_id": [
"catalog_core"
],
"dataset_version": [
"catalog_core"
],
"url": [
"catalog_core",
"tabby"
],
"authors": [
"tabby"
],
"name": [
"tabby"
],
"description": [
"tabby"
],
"keywords": [
"tabby"
],
"funding": [
"tabby"
],
"subdatasets": [
"tabby"
],
"additional_display": [
"tabby"
]
},
"sources": [
{
"source_name": "catalog_core",
"source_version": "1",
"source_parameter": {},
"source_time": 1717677095.963958,
"agent_email": "s.heunis@fz-juelich.de",
"agent_name": "Stephan Heunis"
},
{
"source_name": "tabby",
"source_version": "0.1.0",
"source_parameter": {},
"source_time": 1717677095.999763,
"agent_name": "Stephan Heunis",
"agent_email": "s.heunis@fz-juelich.de"
}
]
},
"url": [
"https://www.abcd-j.de/",
"https://github.com/abcd-j/data.git"
],
"authors": [
{
"name": "ABCD-J Research Consortium"
}
],
"name": "The ABCD-J Data Catalog",
"alias": "abcdj",
"description": "This data catalog contains datasets from the ABCD-J research community project, officially titled \u201cVerbundprojekt: Accessing Behavior for Clinical Data and Joint usage (ABCD-J) - Eine Plattform f\u00fcr Verhaltensmarker der digitalen Neuromedizin in NRW\u201d. This project is a collaboration between five research institutions in the German state of North Rhine-Westphalia: University Clinic RWTH Aachen, University Clinic Bonn, University Clinic K\u00f6ln, University Clinic D\u00fcsseldorf and Research Centre J\u00fclich. The overarching goal of ABCD-J is to elevate existing technical solutions for research practice adoption. From the social perspective, the ABCD-J project aims to promote and facilitate collaboration between multiple research centres, while from the technical perspective the project will accelerate research through homogenization of workflows and processes, with particular emphasis on digital biomarker development.",
"keywords": [
"Aachen",
"Bonn",
"Cologne",
"D\u00fcsseldorf",
"J\u00fclich",
"Collaboration",
"Research",
"Open data",
"FAIR",
"Biomarker",
"Clinical",
"Behaviour"
],
"funding": [
{
"@type": "schema:Grant",
"name": "MKW-NRW: Ministerium f\u00fcr Kultur und Wissenschaft des Landes Nordrhein-Westfalen",
"identifier": "Kooperationsplattformen 2022: KP22-106A",
"schema:url": "https://www.mkw.nrw/"
}
],
"subdatasets": [
{
"dataset_id": "3f8a45c0-08fc-479c-b561-cb6f744d2b5c",
"dataset_version": "32f3303308c89b037fe1700547348470539a30cb",
"dataset_path": "FZJ/jumax",
"dataset_url": null,
"dirs_from_path": [
"FZJ",
"jumax"
]
},
{
"dataset_id": "0036b2c6-f131-4660-9ef9-945087ad02d3",
"dataset_version": "1139b4c82d7ecd0d9ab25bf4c00ec2c06461d6da",
"dataset_path": "FZJ/movies",
"dataset_url": null,
"dirs_from_path": [
"FZJ",
"movies"
]
},
{
"dataset_id": "db7592d0-6206-5684-a29c-8059a6033241",
"dataset_version": "0.1.0",
"dataset_path": "UKD/ocr-PIRA-cohort",
"dataset_url": null,
"dirs_from_path": [
"UKD",
"ocr-PIRA-cohort"
]
},
{
"dataset_id": "372e66b3-e654-4a0f-ba4c-6394bf314f2f",
"dataset_version": "d468e9a9455b38b959db34bc5335fd66e42b2884",
"dataset_path": "FZJ/EMA_Pilot",
"dataset_url": null,
"dirs_from_path": [
"FZJ",
"EMA_Pilot"
]
},
{
"dataset_id": "d72933c1-a660-5970-8bfd-48fcdac59dc5",
"dataset_version": "latest",
"dataset_path": "UKD/Gliem-Pavic",
"dataset_url": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE167274",
"dirs_from_path": [
"UKD",
"Gliem-Pavic"
]
},
{
"dataset_id": "c0ebe952-528e-40c8-a44f-4a80bff28ffb",
"dataset_version": "4f5d78d24e6be85d26e22fbc088b2d8469163758",
"dataset_path": "FZJ/SpEx",
"dataset_url": "https://data.fz-juelich.de/dataset.xhtml?persistentId=doi:10.26165/JUELICH-DATA/CHWZDZ",
"dirs_from_path": [
"FZJ",
"SpEx"
]
},
{
"dataset_id": "7c943b09-cdae-5037-9d03-9c570b3100d0",
"dataset_version": "1.0",
"dataset_path": "UKD/Immune_repertoire_sequencing/CD52-MS-IR-bulk-Seq",
"dataset_url": null,
"dirs_from_path": [
"UKD",
"Immune_repertoire_sequencing",
"CD52-MS-IR-bulk-Seq"
]
},
{
"dataset_id": "00d6eafd-f01d-5d24-8cfe-bbb463f0dc94",
"dataset_version": "1.0",
"dataset_path": "UKD/Immune_repertoire_sequencing/CD20-MS-IR-bulk-Seq",
"dataset_url": null,
"dirs_from_path": [
"UKD",
"Immune_repertoire_sequencing",
"CD20-MS-IR-bulk-Seq"
]
},
{
"dataset_id": "25277dfb-826b-5378-8bec-f02c130b5613",
"dataset_version": "1.0",
"dataset_path": "UKD/Immune_repertoire_sequencing/MG-BCR-IR-bulk-Seq",
"dataset_url": null,
"dirs_from_path": [
"UKD",
"Immune_repertoire_sequencing",
"MG-BCR-IR-bulk-Seq"
]
},
{
"dataset_id": "5c792d7e-9fba-586e-a1a1-38ac0251ebea",
"dataset_version": "1.0",
"dataset_path": "UKD/Immune_repertoire_sequencing/FTY720-MS-IR-bulk-Seq",
"dataset_url": null,
"dirs_from_path": [
"UKD",
"Immune_repertoire_sequencing",
"FTY720-MS-IR-bulk-Seq"
]
},
{
"dataset_id": "86d651fa-bc70-571f-ae19-a99374110de7",
"dataset_version": "1.0",
"dataset_path": "UKD/Immune_repertoire_sequencing/TCR-Seq-EBV-KSHV-infected-humanized-mice",
"dataset_url": null,
"dirs_from_path": [
"UKD",
"Immune_repertoire_sequencing",
"TCR-Seq-EBV-KSHV-infected-humanized-mice"
]
},
{
"dataset_id": "d1b56ad8-f8e9-5d4b-aa76-fe1c155ad201",
"dataset_version": "1.0",
"dataset_path": "UKD/GAD-AINS-sc-Seq",
"dataset_url": null,
"dirs_from_path": [
"UKD",
"GAD-AINS-sc-Seq"
]
},
{
"dataset_id": "24db8b98-84eb-58a2-ac44-1e7314a32324",
"dataset_version": "0.1.0",
"dataset_path": "UKD/TMS-DTI-ALS",
"dataset_url": null,
"dirs_from_path": [
"UKD",
"TMS-DTI-ALS"
]
}
],
"additional_display": [
{
"name": "ABCD-J",
"icon": "fa-solid fa-graduation-cap",
"content": {
"@context": {
"homepage": "https://schema.org/mainEntityOfPage",
"data controller": "https://w3id.org/dpv#hasDataController",
"sample (organism)": "https://openminds.ebrains.eu/controlledTerms/Species",
"sample (organism part)": "https://openminds.ebrains.eu/controlledTerms/UBERONParcellation",
"used for": "http://www.w3.org/ns/prov#hadUsage"
},
"homepage": {
"@type": "https://schema.org/URL",
"@value": "https://www.abcd-j.de/"
}
}
}
]
}
2 changes: 1 addition & 1 deletion catalog/metadata/1015ed7c-0a3d-4dfc-9c4f-11fe71673a41/90eb6d77d0622afac1fae8130ee50b58.json
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{"type": "redirect", "dataset_id": "1015ed7c-0a3d-4dfc-9c4f-11fe71673a41", "dataset_version": "08054201bce2cac59e62c0b7dd9a63ea133174c8"}
{"type": "redirect", "dataset_id": "1015ed7c-0a3d-4dfc-9c4f-11fe71673a41", "dataset_version": "5344fdc107357bdf7f5bfbcf39c8870ed517fd54"}
14 changes: 13 additions & 1 deletion ...etadata/24db8b98-84eb-58a2-ac44-1e7314a32324/0.1.0/e83/e03a219d2894c4f41255fdf129094.json
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Expand Up @@ -57,6 +57,9 @@
],
"additional_display": [
"tabby"
],
"alias": [
"automated_alias_entry"
]
},
"sources": [
Expand All @@ -67,6 +70,14 @@
"source_time": 1717677094.362647,
"agent_name": "Stephan Heunis",
"agent_email": "s.heunis@fz-juelich.de"
},
{
"source_name": "automated_alias_entry",
"source_version": "0.1.0",
"source_parameter": {},
"source_time": 1717679586.304658,
"agent_name": "Stephan Heunis",
"agent_email": "s.heunis@fz-juelich.de"
}
]
},
Expand Down Expand Up @@ -151,5 +162,6 @@
}
}
}
]
],
"alias": "TMS-DTI-ALS"
}
1 change: 1 addition & 0 deletions catalog/metadata/24db8b98-84eb-58a2-ac44-1e7314a32324/c417daa7a840d831221fd417d90cdef3.json
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@@ -0,0 +1 @@
{"type": "redirect", "dataset_id": "24db8b98-84eb-58a2-ac44-1e7314a32324", "dataset_version": "0.1.0"}
1 change: 1 addition & 0 deletions catalog/metadata/GAD-AINS-sc-Seq/794b87dae52cc90716ff194356ff1233.json
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{"type": "redirect", "dataset_id": "d1b56ad8-f8e9-5d4b-aa76-fe1c155ad201"}
1 change: 1 addition & 0 deletions catalog/metadata/TMS-DTI-ALS/8c75ecc922ed5cf80bc5a8099fcf5ef5.json
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@@ -0,0 +1 @@
{"type": "redirect", "dataset_id": "24db8b98-84eb-58a2-ac44-1e7314a32324"}
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