udate requirements

ablab · Oct 26, 2023 · 4be26cc · 4be26cc
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diff --git a/README.md b/README.md
@@ -127,6 +127,7 @@ You will also need
 * [pybedtools](https://daler.github.io/pybedtools/)
 * [pyfaidx](https://pypi.org/project/pyfaidx/)
 * [pandas](https://pandas.pydata.org/)
+* [pyyaml](https://pypi.org/project/PyYAML/)
 * [minimap2](https://github.com/lh3/minimap2)
 * [samtools](http://www.htslib.org/download/)
 * [STAR](https://github.com/alexdobin/STAR) (optional)

diff --git a/requirements.txt b/requirements.txt
@@ -5,3 +5,4 @@ pybedtools>=0.8.1
 pysam>=0.15
 packaging
 pyfaidx>=0.7
+pyyaml>=5.4
diff --git a/requirements_tests.txt b/requirements_tests.txt
@@ -11,3 +11,4 @@ pysam>=0.15
 simplejson==3.17.0
 six==1.14.0
 pyfaidx>=0.7
+pyyaml>=5.4