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Workflow file for this run

name: SPAdes 1k test
on: [push]
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-latest, macos-latest ]
steps:
- uses: actions/checkout@v1
with:
fetch-depth: 1
- name: compile
run: assembler/spades_compile.sh -j3
- name: multi-cell mode check
run: bin/spades.py --test
- name: single-cell mode check
run: bin/spades.py --sc --test
- name: plasmid mode check
run: bin/plasmidspades.py --test
- name: metagenomic mode check
run: bin/metaspades.py --test