fixed manual misc dir

assembler/rnaspades_manual.html

@@ -87,7 +87,7 @@ <h3>2.4 rnaSPAdes output</h3>
 rnaSPAdes outputs one main FASTA file named <code>transcripts.fasta</code>. The corresponding file with paths in the <code>assembly_graph.fastg</code> is <code>transcripts.paths</code>.
 
 <p> 
-In addition rnaSPAdes outputs transcripts with different level of filtration into <code>misc/</code> folder: <br>
+In addition rnaSPAdes outputs transcripts with different level of filtration into <code>&lt;output_dir>/</code>: <br>
     <ul>
         <li><code>hard_filtered_transcripts.fasta</code> &ndash; includes only long and reliable transcripts with rather high expression.</li>
         <li><code>soft_filtered_transcripts.fasta</code> &ndash; includes short and low-expressed transcipts, likely to contain junk sequences.</li>