readme

README.md

@@ -55,30 +55,17 @@ Command line option                  | Description
 `--NToys` (default 1000)             | number of toys per point
 `--NWorkers` (default 0)             | number of worker for ProofLite (default use all available cores)
 `--RandomSeed` (default -1)          | random seed (if = -1: use default value, if = 0 always random ) NOTE: Proof uses automatically a random seed
-`--Rebuild` (default 0)              | re-do extra toys for computing expected limits and rebuild test stat distributions (N.B this requires much more CPU
-                                     | (factor is equivalent to nToyToRebuild)
+`--Rebuild` (default 0)              | re-do extra toys for computing expected limits and rebuild test stat distributions (N.B this requires much more CPU (factor is equivalent to nToyToRebuild)
 `--NToyToRebuild` (default 100)      | number of toys used to rebuild
-`--RebuildParamValues` (default 0)   | = 0 do a profile of all the parameters on the B (alt snapshot) before performing a rebuild operation (default)
-                                     | = 1 use initial workspace parameters with B snapshot values
-                                     | = 2 use all initial workspace parameters with B
-                                     | Otherwise the rebuild will be performed using [text missing, I assume it works like 2]
+`--RebuildParamValues` (default 0)   | = 0 do a profile of all the parameters on the B (alt snapshot) before performing a rebuild operation (default)<br> = 1 use initial workspace parameters with B snapshot values<br> = 2 use all initial workspace parameters with B<br> Otherwise the rebuild will be performed using [text missing, I assume it works like 2]
 `--GenerateBinned` (default 0)       | generate binned data sets
 `--NoSystematics` (default 0)        | force all systematics to be off (i.e. set all nuisance parameters as constant to their nominal values)
 `--Optimize` (default 1)             | optimize evaluation of test statistic
 `--UseNLLOffset` (default 0)         | use NLL offset when fitting (this increase stability of fits)
 `--UseVectorStore` (default 1)       | convert data to use new roofit data store
-`--CalculatorType` (default 0)       | = 0 Freq calculator
-                                     | = 1 Hybrid calculator
-                                     | = 2 Asymptotic calculator
-                                     | = 3 Asymptotic calculator using nominal Asimov data sets (not using fitted parameter values but nominal ones)
+`--CalculatorType` (default 0)       | = 0 Freq calculator<br> = 1 Hybrid calculator<br> = 2 Asymptotic calculator<br> = 3 Asymptotic calculator using nominal Asimov data sets (not using fitted parameter values but nominal ones)
 `--NAsimovBins` (default 0)          | number of bins in observables used for Asimov data sets (0 is the default and it is given by workspace, typically is 100)
-`--TestStatType` (default 2)         | = 0 LEP
-                                     | = 1 Tevatron
-                                     | = 2 Profile Likelihood
-                                     | = 3 Profile Likelihood one sided (i.e. = 0 if mu < mu_hat)
-                                     | = 4 Profile Likelihood signed ( pll = -pll if mu < mu_hat)
-                                     | = 5 Max Likelihood Estimate as test statistic
-                                     | = 6 Number of observed event as test statistic
+`--TestStatType` (default 2)         | = 0 LEP<br> = 1 Tevatron<br> = 2 Profile Likelihood<br> = 3 Profile Likelihood one sided (i.e. = 0 if mu < mu_hat)<br> = 4 Profile Likelihood signed ( pll = -pll if mu < mu_hat)<br> = 5 Max Likelihood Estimate as test statistic<br> = 6 Number of observed event as test statistic
 `--UseNumberCounting` (default 0)    | set to true when using number counting events
 `--MinimizerType`                    | minimizer type (default is what is in ROOT::Math::MinimizerOptions::DefaultMinimizerType()