This code is always in development
Emily Markowitz (Emily.Markowitz AT noaa.gov; @EmilyMarkowitz-NOAA)
Sean Rohan (Sean.Rohan AT noaa.gov; @MargaretSiple-NOAA)
Megsie Siple (Margaret.Siple AT noaa.gov; @MargaretSiple-NOAA)
Liz Dawson (Liz.Dawson AT noaa.gov; @liz-dawson-NOAA)
Alaska Fisheries Science Center,
National Marine Fisheries Service,
National Oceanic and Atmospheric Administration,
Seattle, WA 98195
#> Warning: `git_branch_default()` was deprecated in usethis 2.1.0.
#> ℹ Please use `git_default_branch()` instead.
#> ℹ The deprecated feature was likely used in the badger package.
#> Please report the issue at <https://github.com/GuangchuangYu/badger/issues>.
#> This warning is displayed once every 8 hours.
#> Call `lifecycle::last_lifecycle_warnings()` to see where this warning was generated.
library(devtools)
devtools::install_github("afsc-gap-products/GAPsurvey")
# Or
remotes::install_github("afsc-gap-products/GAPsurvey@main")
library(GAPsurvey)
Use the below bibtext citations for citing the package created and maintained in this repo. Add “note = {Accessed: mm/dd/yyyy}” to append the day this data was accessed.
#> @misc{GAPsurvey,
#> author = {{NOAA Fisheries Alaska Fisheries Science Center, Goundfish Assessment Program}},
#> year = {2024},
#> title = {AFSC Goundfish Assessment Program at-Sea data management tools for RACE GAP surveys},
#> howpublished = {https://www.fisheries.noaa.gov/alaska/science-data/groundfish-assessment-program-bottom-trawl-surveys},
#> publisher = {{U.S. Dep. Commer.}},
#> copyright = {Public Domain}
#> }
This package was last produced using:
#> R version 4.4.1 (2024-06-14 ucrt)
#> Platform: x86_64-w64-mingw32/x64
#> Running under: Windows 10 x64 (build 19045)
#>
#> Matrix products: default
#>
#>
#> locale:
#> [1] LC_COLLATE=English_United States.utf8 LC_CTYPE=English_United States.utf8 LC_MONETARY=English_United States.utf8
#> [4] LC_NUMERIC=C LC_TIME=English_United States.utf8
#>
#> time zone: America/Los_Angeles
#> tzcode source: internal
#>
#> attached base packages:
#> [1] stats4 stats graphics grDevices utils datasets methods base
#>
#> other attached packages:
#> [1] badger_0.2.4 gapindex_2.2.0 pkgdown_2.1.0 gapctd_2.1.6 lubridate_1.9.3 plotly_4.10.4 interp_1.1-6
#> [8] bbmle_1.0.25.1 oce_1.8-3 gsw_1.2-0 tidyr_1.3.1 plyr_1.8.9 remotes_2.5.0 roxygen2_7.3.2
#> [15] devtools_2.4.5 usethis_3.0.0 here_1.0.1 akgfmaps_3.5.3 terra_1.7-78 stars_0.6-6 abind_1.4-8
#> [22] sf_1.0-17 gstat_2.1-2 ggplot2_3.5.1 classInt_0.4-10 RODBC_1.3-23 dplyr_1.1.4 readr_2.1.5
#> [29] magrittr_2.0.3
#>
#> loaded via a namespace (and not attached):
#> [1] RColorBrewer_1.1-3 sys_3.4.2 rstudioapi_0.16.0 dlstats_0.1.7 jsonlite_1.8.8
#> [6] rmarkdown_2.28 fs_1.6.4 vctrs_0.6.5 memoise_2.0.1 askpass_1.2.0
#> [11] gh_1.4.1 janitor_2.2.0 htmltools_0.5.8.1 curl_5.2.2 KernSmooth_2.23-24
#> [16] htmlwidgets_1.6.4 desc_1.4.3 httr2_1.0.4 zoo_1.8-12 cachem_1.1.0
#> [21] mime_0.12 lifecycle_1.0.4 pkgconfig_2.0.3 Matrix_1.7-0 R6_2.5.1
#> [26] fastmap_1.2.0 shiny_1.9.1 snakecase_0.11.1 digest_0.6.37 numDeriv_2016.8-1.1
#> [31] colorspace_2.1-1 ps_1.8.0 rprojroot_2.0.4 pkgload_1.4.0 fansi_1.0.6
#> [36] timechange_0.3.0 httr_1.4.7 compiler_4.4.1 proxy_0.4-27 intervals_0.15.5
#> [41] withr_3.0.1 DBI_1.2.3 pkgbuild_1.4.4 MASS_7.3-60.2 openssl_2.2.1
#> [46] rappdirs_0.3.3 sessioninfo_1.2.2 tools_4.4.1 units_0.8-5 httpuv_1.6.15
#> [51] glue_1.7.0 callr_3.7.6 promises_1.3.0 grid_4.4.1 generics_0.1.3
#> [56] gtable_0.3.5 tzdb_0.4.0 class_7.3-22 data.table_1.16.0 hms_1.1.3
#> [61] sp_2.1-4 xml2_1.3.6 utf8_1.2.4 pillar_1.9.0 stringr_1.5.1
#> [66] yulab.utils_0.1.7 later_1.3.2 lattice_0.22-6 FNN_1.1.4 deldir_2.0-4
#> [71] tidyselect_1.2.1 rvcheck_0.2.1 miniUI_0.1.1.1 knitr_1.48 gitcreds_0.1.2
#> [76] xfun_0.47 credentials_2.0.1 stringi_1.8.4 lazyeval_0.2.2 yaml_2.3.10
#> [81] evaluate_0.24.0 codetools_0.2-20 tibble_3.2.1 BiocManager_1.30.25 cli_3.6.3
#> [86] xtable_1.8-4 munsell_0.5.1 processx_3.8.4 spacetime_1.3-2 Rcpp_1.0.13
#> [91] gert_2.1.1 bdsmatrix_1.3-7 parallel_4.4.1 ellipsis_0.3.2 profvis_0.3.8
#> [96] urlchecker_1.0.1 viridisLite_0.4.2 mvtnorm_1.3-1 scales_1.3.0 xts_0.14.0
#> [101] e1071_1.7-14 crayon_1.5.3 purrr_1.0.2 rlang_1.1.4
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