Merge pull request #48 from afsc-gap-products/EBS-2023

EBS/NBS 2023 update
afsc-gap-products · Sep 29, 2023 · 4583c0b · 4583c0b
2 parents 6366726 + de5ed9a
commit 4583c0b
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diff --git a/.gitignore b/.gitignore
@@ -42,6 +42,5 @@ Meta
 /archive/
 *.csv
 0_update_condition_data.html
-/*.bib
 /*.csl
 /*.docx/
diff --git a/CopyOfEBS_references.bib b/CopyOfEBS_references.bib
diff --git a/EBS_GroundfishCondition_2023.Rmd b/EBS_GroundfishCondition_2023.Rmd
diff --git a/EBS_references.bib b/EBS_references.bib
diff --git a/R/sysdata.rda b/R/sysdata.rda
diff --git a/data/AI_INDICATOR.rda b/data/AI_INDICATOR.rda
diff --git a/data/EBS_INDICATOR.rda b/data/EBS_INDICATOR.rda
diff --git a/data/GOA_INDICATOR.rda b/data/GOA_INDICATOR.rda
diff --git a/data/NBS_INDICATOR.rda b/data/NBS_INDICATOR.rda
diff --git a/data/PCOD_ESP.rda b/data/PCOD_ESP.rda
diff --git a/inst/extdata/raw_lw_bio.rda b/inst/extdata/raw_lw_bio.rda
diff --git a/plots/BS/Alaska plaice/EBS_STRATUM_CONDITION_Alaska plaice.png b/plots/BS/Alaska plaice/EBS_STRATUM_CONDITION_Alaska plaice.png
diff --git a/plots/BS/Alaska plaice/NBS_STRATUM_CONDITION_Alaska plaice.png b/plots/BS/Alaska plaice/NBS_STRATUM_CONDITION_Alaska plaice.png
diff --git a/plots/BS/EBS_NBS_survey_area.png b/plots/BS/EBS_NBS_survey_area.png
diff --git a/plots/BS/EBS_SBW_stratum_stacked_bar.png b/plots/BS/EBS_SBW_stratum_stacked_bar.png
diff --git a/plots/BS/EBS_SBW_timeseries.png b/plots/BS/EBS_SBW_timeseries.png
diff --git a/plots/BS/EBS_condition.png b/plots/BS/EBS_condition.png
diff --git a/plots/BS/NBS_SBW_stratum_stacked_bar.png b/plots/BS/NBS_SBW_stratum_stacked_bar.png
diff --git a/plots/BS/NBS_SBW_timeseries.png b/plots/BS/NBS_SBW_timeseries.png
diff --git a/plots/BS/NBS_condition.png b/plots/BS/NBS_condition.png
diff --git a/plots/BS/Pacific cod/EBS_STRATUM_CONDITION_Pacific cod.png b/plots/BS/Pacific cod/EBS_STRATUM_CONDITION_Pacific cod.png
diff --git a/plots/BS/Pacific cod/NBS_STRATUM_CONDITION_Pacific cod.png b/plots/BS/Pacific cod/NBS_STRATUM_CONDITION_Pacific cod.png
diff --git a/plots/BS/arrowtooth flounder/EBS_STRATUM_CONDITION_arrowtooth flounder.png b/plots/BS/arrowtooth flounder/EBS_STRATUM_CONDITION_arrowtooth flounder.png
diff --git a/plots/BS/flathead sole/EBS_STRATUM_CONDITION_flathead sole.png b/plots/BS/flathead sole/EBS_STRATUM_CONDITION_flathead sole.png
diff --git a/plots/BS/northern rock sole/EBS_STRATUM_CONDITION_northern rock sole.png b/plots/BS/northern rock sole/EBS_STRATUM_CONDITION_northern rock sole.png
diff --git a/...eye pollock (100–250 mm)/EBS_STRATUM_CONDITION_walleye pollock (100–250 mm).png b/...eye pollock (100–250 mm)/EBS_STRATUM_CONDITION_walleye pollock (100–250 mm).png
diff --git a/...eye pollock (100–250 mm)/NBS_STRATUM_CONDITION_walleye pollock (100–250 mm).png b/...eye pollock (100–250 mm)/NBS_STRATUM_CONDITION_walleye pollock (100–250 mm).png
diff --git a/...walleye pollock (gt250 mm)/EBS_STRATUM_CONDITION_walleye pollock (gt250 mm).png b/...walleye pollock (gt250 mm)/EBS_STRATUM_CONDITION_walleye pollock (gt250 mm).png
diff --git a/...walleye pollock (gt250 mm)/NBS_STRATUM_CONDITION_walleye pollock (gt250 mm).png b/...walleye pollock (gt250 mm)/NBS_STRATUM_CONDITION_walleye pollock (gt250 mm).png
diff --git a/plots/BS/yellowfin sole/EBS_STRATUM_CONDITION_yellowfin sole.png b/plots/BS/yellowfin sole/EBS_STRATUM_CONDITION_yellowfin sole.png
diff --git a/plots/BS/yellowfin sole/NBS_STRATUM_CONDITION_yellowfin sole.png b/plots/BS/yellowfin sole/NBS_STRATUM_CONDITION_yellowfin sole.png