genomics-tools

The projects in this repository are focused around the Google Genomics API.

• client-java provides a command line interface for API queries, and demonstrates how a more complex Java client might be written.

• client-python provides an example web interface that depends on API queries, and demonstrates how a more complex Python client might be written. It uses Google App Engine to deploy.

• mapreduce-python uses the MapReduce Python feature of Google App Engine to do complex calculations over API data.

• readstore-local-java implements the Genomics API locally, reading its data from a local BAM file.

Contributing changes

• See CONTRIB.md

Licensing

• See LICENSE