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0.4.2

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@althonos althonos released this 20 Jun 14:53
· 829 commits to master since this release

Added

  • pyhmmer.easel.Randomness class exposing a deterministic random number generator.
  • pyhmmer.plan7.Builder.randomness and pyhmmer.plan7.Pipeline.randomness attributes exposing the internal random number generator used by each object.
  • pyhmmer.plan7.Hit.best_domain property mapping to the highest scoring domain of a hit.
  • pyhmmer.plan7.OptimizedProfile.rbv property exposing match scores.
  • pyhmmer.plan7.Domain.pvalue and pyhmmer.plan7.Hit.pvalue reporting the p-value for a domain or hit bitscore.

Fixed

  • Dimensions of the pyhmmer.plan7.OptimizedProfile.sbv matrix not being properly set.