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1. slide-image-utils slide-image-utils Public

   A package for processing immunofluorescence (IF) microscopy image data.

   Python 2

2. inferCNV inferCNV Public

   Pipeline for inferring single cell copy number variation profiles from scRNA-seq data.

   Python

3. mapIMC2IF mapIMC2IF Public

   Integration of single cell morphology data from immunofluorescent microscopy and protein expression data from imaging mass cytometry using point set registration and closest point assignment based …

   Python

4. representation-learning-papers-in-single-cell-microscopy representation-learning-papers-in-single-cell-microscopy Public

   This repository holds an updated track of representation learning papers with application in single cell microscopy data.