amkozlov · astanabe · Nov 27, 2018 · Nov 27, 2018 · Nov 27, 2018 · Nov 27, 2018
diff --git a/.gitignore b/.gitignore
diff --git a/.gitmodules b/.gitmodules
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -84,7 +84,7 @@ endif()
 message (STATUS "Building ${CMAKE_BUILD_TYPE}")
 
 set (WARN_FLAGS               "-Wall -Wextra")
-set (CMAKE_CXX_FLAGS          "-std=c++11 ${WARN_FLAGS}")
+set (CMAKE_CXX_FLAGS          "-std=gnu++11 ${WARN_FLAGS}")
 
 if (ENABLE_GMP)
 #find_package(GMP REQUIRED)

diff --git a/LICENSE.txt b/LICENSE.txt
diff --git a/README.md b/README.md
diff --git a/libs/CMakeLists.txt b/libs/CMakeLists.txt
diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
diff --git a/src/Checkpoint.cpp b/src/Checkpoint.cpp
diff --git a/src/Checkpoint.hpp b/src/Checkpoint.hpp
diff --git a/src/CommandLineParser.cpp b/src/CommandLineParser.cpp
diff --git a/src/CommandLineParser.hpp b/src/CommandLineParser.hpp
diff --git a/src/ICScoreCalculator.cpp b/src/ICScoreCalculator.cpp
diff --git a/src/ICScoreCalculator.hpp b/src/ICScoreCalculator.hpp
diff --git a/src/MSA.cpp b/src/MSA.cpp
diff --git a/src/MSA.hpp b/src/MSA.hpp
diff --git a/src/Model.cpp b/src/Model.cpp
diff --git a/src/Model.hpp b/src/Model.hpp
diff --git a/src/Optimizer.cpp b/src/Optimizer.cpp
diff --git a/src/Optimizer.hpp b/src/Optimizer.hpp
diff --git a/src/Options.cpp b/src/Options.cpp
diff --git a/src/Options.hpp b/src/Options.hpp
diff --git a/src/ParallelContext.cpp b/src/ParallelContext.cpp
diff --git a/src/ParallelContext.hpp b/src/ParallelContext.hpp
diff --git a/src/PartitionInfo.cpp b/src/PartitionInfo.cpp
diff --git a/src/PartitionInfo.hpp b/src/PartitionInfo.hpp
diff --git a/src/PartitionedMSA.cpp b/src/PartitionedMSA.cpp
diff --git a/src/PartitionedMSA.hpp b/src/PartitionedMSA.hpp
diff --git a/src/PartitionedMSAView.cpp b/src/PartitionedMSAView.cpp
diff --git a/src/PartitionedMSAView.hpp b/src/PartitionedMSAView.hpp
diff --git a/src/Tree.cpp b/src/Tree.cpp
diff --git a/src/Tree.hpp b/src/Tree.hpp
diff --git a/src/TreeInfo.cpp b/src/TreeInfo.cpp
diff --git a/src/TreeInfo.hpp b/src/TreeInfo.hpp
diff --git a/src/autotune/ResourceEstimator.cpp b/src/autotune/ResourceEstimator.cpp
diff --git a/src/autotune/ResourceEstimator.hpp b/src/autotune/ResourceEstimator.hpp