Docs: Added metrics table + paper citation #81
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name: Build | |
on: | |
push: | |
branches: | |
- "*" | |
pull_request: | |
branches: | |
- "*" | |
workflow_dispatch: | |
jobs: | |
build: | |
runs-on: ubuntu-20.04 | |
steps: | |
- uses: actions/checkout@v1 | |
- name: Set up Python 3.7 | |
uses: actions/setup-python@v2 | |
with: | |
python-version: 3.7 | |
- name: Install dependencies | |
run: pip install wheel setuptools | |
- name: Build wheel | |
run: python setup.py bdist_wheel --universal | |
- name: Upload Python wheel | |
uses: actions/upload-artifact@v2 | |
with: | |
name: Python wheel | |
path: ${{github.workspace}}/dist/livermask-*.whl | |
if-no-files-found: error | |
test: | |
needs: build | |
runs-on: ${{ matrix.os }} | |
strategy: | |
# max-parallel: 10 | |
matrix: | |
os: [ windows-2019, ubuntu-20.04, macos-11 ] | |
python-version: [ 3.7 ] | |
steps: | |
- uses: actions/checkout@v1 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v2 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Download artifact | |
uses: actions/download-artifact@master | |
with: | |
name: "Python wheel" | |
- name: Install wheel | |
run: pip install --find-links=. livermask-* | |
shell: bash | |
- name: Test CLI | |
run: livermask --help | |
- name: Download test sample | |
run: | | |
pip install gdown==4.4.0 | |
mkdir samples | |
mkdir results | |
cd samples | |
gdown https://drive.google.com/uc?id=1shjSrFjS4PHE5sTku30PZTLPZpGu24o3 | |
gdown https://drive.google.com/uc?id=1bNmls5o0Rxw5HvBF1IYnEzmpysYJaywN | |
- name: Test inference .nii | |
run: | | |
livermask --input samples --output results --verbose --vessels |