Version 2.4.3

This is a Windows only build. For MacOS and source code, please see Version 2.4.2.

• Fixed issue where Windows version was compiled without some extra scripts (e.g. 'wmean').

Version 2.4.2

• Fixed issue where new version of MATLAB broke the HDExaminer file conversion tool
• Fixed minor issue with kinetics plot y-axis scale
• Changed xticklabels of barcode plots to better show residue labels
• Fixed bug where MATLAB was breaking when trying to remove columns from the 'filtered table' that didn't exist when plotting non-statistically filtered butterfly and woods plots

Version 2.4.1

• Fixed an issue with with back exchange example and code not working
• Updated some functions to match how newer versions of MATLAB perform matrix multiplication
• Made some changes to the kinetics plot to properly show the back exchange level (if applicable) and rescaled the y-axis to fit on the plot after back exchange correction
• Fixed an issue with large tables (BX: Control and Filtered Peptides) not displaying properly in the MATLAB uitable.
• Fixed an issue where importing data was failing due to MATLAB throwing an error about converting already numeric data to numeric
• Updated releases to use semantic versioning
• Redesigned the application icon
• Both Mac and Windows versions of v2.4.1 were compiled using MATLAB R2022b on an Apple Silicon MacBook Pro running MacOS Monterey v12.6
• Windows build was compiled within a virtual env of Windows 11 (contact if there are issues)

Version 2.3.2

• (These versions were added retroactively and might not work properly - please open an issue if there are problems)
• Fixed bug where plots could not be exported for Advanced plots
• Fixed bug where exported figures were being saved as .svg files but were not vector images

Version 2.3.1

• (These versions were added retroactively and might not work properly - please open an issue if there are problems)
• Added additional checks to ensure that the same charge state is used for differential comparisons
• Fixed plot scaling for butterfly plots when the number of peptides is small
• Added file conversion tool that handles conversion of files from HDExaminer into the DynamX cluster format. Standalone version of the tool is also available as a Colab notebook

Version 2.2.2

• (These versions were added retroactively and might not work properly - please open an issue if there are problems)
• Fixed bug with back-exchange correction. Previous equation incorrectly uses centroid m/z values for m, m0 and m100. Equation has been fixed to instead use centroid mass
• Fixed bug with kinetics plot where unique() was returning the wrong number of timepoints
• Added barcode plots to the 'Coverage Plot' section
• Fixed bug where exporting a coverage plot would save the plot in the wrong dimensions

Version 2.1.2

• (These versions were added retroactively and might not work properly - please open an issue if there are problems)
• Updated average residue redundancy calculation. Previously this was calculated over all residues regardless of whether there was coverage or not. The new calculation reports only the average residue redundancy for regions with coverage.
• Fixed bug where appending data to data table tab caused importing to crash
• Added progress bar to import function
• Minor bug fix with progress bar