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1. parseR parseR Public

   parseR: Pipeline for rna-seq analysis in R

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2. rseqR rseqR Public

   An R-based pipeline to analyse RNA-seq data. This pipeline performs quality control of reads, generates gene and transcript level counts, performs differential analysis, and gene pathway enrichment…

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3. snpR snpR Public

   R-based tools to deal with SNP data and data from the GWAS catalog

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4. chompR chompR Public

   An R-based pipeline to analyse chromatin modification high throughput sequencing data. This pipeline performs quality control of reads, performs peak-calling, differential peak-calling, and pathway…

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5. juggleR juggleR Public

   Collection of functions that help with easily manipulating data.frames and managing files from within R.

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6. fiddleR fiddleR Public

   Functions to manipulate files and directories directly from R