miRNA-neural-network

• A function to prepare the neural network sequence for the miRNA predictions.
• It uses the target prediction and the transcript and prepares the targets for the neural networks.
• a machine learning preparation for the microRNAs after the target predictions.
• It will extract the microRNA binding sites and also the upstream and the dowstream to prepare for the motif machine learning.

preparemiRNAsML("/Users/gauravsablok/Desktop/release/Athaliana_167_TAIR10.transcript.fa", \
                                                "/Users/gauravsablok/Desktop/release/test.txt", \
                                                                 expectation_value="0.0", \
                                                                  upstream = 100, downstream=100)

Gaurav Sablok
University of Potsdam
Potsdam,Germany