Increased boot disk size for sum_fastq_size

aryeelab · Jan 31, 2019 · fef7256 · fef7256
1 parent 64e8cbe
commit fef7256
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Showing 2 changed files with 5 additions and 2 deletions.
diff --git a/CHANGES b/CHANGES
@@ -1,10 +1,13 @@
 ## FireCloud
 ### preprocess_hic
 
+Snapshot ID 40
+    - Increased boot disk size for sum_fastq_size
+
 Snapshot ID 39
     - Fixed hicpro Dockerfile bug resulting in missing Hindiii resfrag files
     - Increased disk size for sum_fastq_size task. TODO: replace with simpler docker image
-	- Use zcat -f for fastqs to allow compressed and/or uncompressed files
+    - Use zcat -f for fastqs to allow compressed and/or uncompressed files
 
 Snapshot ID 38
     - sparseHic task: increased memory from 60GB to 104GB and use a single core

diff --git a/preprocess_hic.wdl b/preprocess_hic.wdl
@@ -112,7 +112,7 @@ task sum_fastq_size {
     }
     runtime {
         docker: "aryeelab/hicpro:latest"
-        disks: "local-disk 20 SSD"
+		bootDiskSizeGb: 20
     }
     output {
         Int gb = read_int(stdout())