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final project of Cameron Park, Joy Fan, and Lauren Friend for the Fall 2020 BMEN 4480 course taught by Dr. Azizi

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azizilab/LF_CP_JF_Final_NMF_Treg-Fibroblast

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LF_CP_JF_Final_NMF_Treg-Fibroblast

final project of Cameron Park, Joy Fan, and Lauren Friend for the Fall 2020 BMEN 4480 course taught by Dr. Azizi

files included:

SML_final_vis: author @Lauren Friend, visualization and initial exploration into the data with a differential expression analysis

circlepacking_mixing_comp_visualization: author @Linyue Fan, circle packing visualization, degree of mixing visualization, visualization by component groups/top components

find degs v2: author @Linyue Fan, code for finding DEGs

statML_team1_NMF_PARK: author @Cameron Park, NMF model, heat map analysis, pie chart and histograms, spot mixing scatter plots, gene signature analysis not inclduing visualizations

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final project of Cameron Park, Joy Fan, and Lauren Friend for the Fall 2020 BMEN 4480 course taught by Dr. Azizi

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